UCNE: chr12_Violet
(id = 10081)

General information about the entry
Entry location:UTR
Position:chr12:69053707-69054305
Length:599 nt
Sequence:chr12_Violet.fasta
Overlapping gene:RAP1B
Paralogs:chr11:10788682-10789207
chr19:44348532-44348878
chr3:103783095-103783931
chr5:75465910-75466454
chr6:117754287-117754387
chr9:18710685-18711222
chr9:30347690-30347830
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr1:37115889-37116495        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr10:117814540-117815135   Identity: 95.83%    E-value: 1.4e-101   Bit-score: 375.8
This UCNE has 7 paralogous regions in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_180728:518-1094   Identity: 95.86%    E-value: 1.9e-88   Bit-score: 332.3
Region #2:   scaffold_34054:2025-2596   Identity: 86.14%    E-value: 4e-70   Bit-score: 271.5
Region #3:   scaffold_32895:11146-11712   Identity: 86.47%    E-value: 3.5e-69   Bit-score: 268.3
Region #4:   scaffold_219548:41-614   Identity: 85.86%    E-value: 1.2e-68   Bit-score: 266.6
Region #5:   scaffold_91247:1149-1704   Identity: 87.13%    E-value: 2.6e-67   Bit-score: 262.1
Region #6:   scaffold_4780:11572-11994   Identity: 90.87%    E-value: 1.6e-54   Bit-score: 219.7
Region #7:   scaffold_6162:48559-48986   Identity: 86.28%    E-value: 6.2e-49   Bit-score: 201.1
Region #8:   scaffold_17937:77913-78340   Identity: 83.18%    E-value: 7.7e-45   Bit-score: 187.5
Region #9:   scaffold_115435:7602-8044   Identity: 80.96%    E-value: 2.9e-43   Bit-score: 182.3
Region #10:   scaffold_12002:39901-40301   Identity: 79.22%    E-value: 3.7e-40   Bit-score: 171.9
Region #11:   scaffold_4900:68062-68501   Identity: 76.85%    E-value: 4.4e-38   Bit-score: 165
Region #12:   scaffold_56691:9330-9658   Identity: 86.34%    E-value: 3.1e-36   Bit-score: 158.9
Region #13:   scaffold_250079:1717-1930   Identity: 98.6%    E-value: 3.1e-29   Bit-score: 135.7
Region #14:   scaffold_54983:12156-12463   Identity: 78.98%    E-value: 1.1e-25   Bit-score: 123.8
Region #15:   scaffold_193597:622-847   Identity: 91.19%    E-value: 2.5e-25   Bit-score: 122.7
Region #16:   scaffold_5602:3656-3944   Identity: 79.35%    E-value: 2.5e-25   Bit-score: 122.7
Region #17:   scaffold_81383:2-240   Identity: 84.92%    E-value: 1.6e-24   Bit-score: 120
Region #18:   scaffold_39615:2-232   Identity: 88.89%    E-value: 2.3e-24   Bit-score: 119.5
Region #19:   scaffold_92881:2-183   Identity: 93.44%    E-value: 2e-20   Bit-score: 106.4
Region #20:   scaffold_4780:12409-12594   Identity: 90.32%    E-value: 1.4e-19   Bit-score: 103.6
Region #21:   scaffold_4646:95812-96229   Identity: 64.48%    E-value: 3.4e-18   Bit-score: 99
Region #22:   scaffold_27806:14952-15112   Identity: 88.89%    E-value: 1e-14   Bit-score: 87.5
Region #23:   scaffold_128641:3010-3126   Identity: 94.02%    E-value: 4.8e-10   Bit-score: 71.9

Opossum (monDom5):
Region #1:   chr8:27148480-27149081   Identity: 95.87%    E-value: 1.9e-90   Bit-score: 339.3
This UCNE has 17 paralogous regions in Opossum

Platypus (ornAna1):
Region #1:   Ultra124:1536247-1536891   Identity: 85.27%    E-value: 2.7e-91   Bit-score: 341.2

Zebra_finch (taeGut1):
Region #1:   chr1A:34613319-34613924   Identity: 95.38%    E-value: 2.2e-104   Bit-score: 384.1

Lizard (anoCar2):
Region #1:   chrUn_GL343256:1374736-1375345   Identity: 94.26%    E-value: 2.7e-112   Bit-score: 410.8

Painted_turtle (chrPic1):
Region #1:   JH584425:1240140-1240746   Identity: 94.74%    E-value: 1.2e-100   Bit-score: 372.7
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL173016:917100-917693   Identity: 85.98%    E-value: 5e-79   Bit-score: 300.1

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr4:17921442-17921539   Identity: 86.87%    E-value: 9.8e-06   Bit-score: 52.2

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):