UCNE: chr13_Hamlet
(id = 10784)

General information about the entry
Entry location:UTR
Position:chr13:31035183-31035473
Length:291 nt
Sequence:chr13_Hamlet.fasta
Overlapping gene:HMGB1
Paralogs:chr1:45998198-45998297
chr1:50864381-50864511
chr1:80749674-80749955
chr1:145018552-145018850
chr1:171239783-171240073
chr1:226599013-226599290
chr1:229840683-229840970
chr10:32202711-32202947
chr10:50760721-50760996
chr10:87708197-87708446
chr11:17748311-17748441
chr11:17751025-17751160
chr11:20596624-20596905
chr11:120806428-120806721
chr12:27856303-27856492
chr13:99206395-99206481
chr14:58752128-58752410
chr14:68082829-68083124
chr15:56616025-56616314
chr15:58965150-58965512
chr15:71456799-71457089
chr15:85483431-85483719
chr15:89678465-89678755
chr17:35500297-35500585
chr19:8258095-8258338
chr2:9158111-9158400
chr2:54279314-54279634
chr2:171457811-171458101
chr2:192039594-192039879
chr2:219066131-219066422
chr2:231380373-231380658
chr20:56063140-56063429
chr22:26957148-26957438
chr3:22423970-22424260
chr3:70803744-70804031
chr3:80006401-80006691
chr3:122547566-122547639
chr3:148542255-148542543
chr4:41843782-41844076
chr4:78885704-78885915
chr5:50705162-50705430
chr5:76443010-76443294
chr5:77939472-77939609
chr5:77939901-77940070
chr5:86077402-86077478
chr5:123555896-123556187
chr5:124601815-124602103
chr6:53099941-53100000
chr6:53100227-53100402
chr6:76028438-76028726
chr6:133189049-133189339
chr6:135956894-135957183
chr8:29077637-29077916
chr8:81723725-81724001
chr8:108185118-108185406
chr8:120866586-120866686
chr8:124135947-124136235
chr9:31482520-31482762
chr9:124281786-124282076
chrX:36229875-36230168
chrX:50673653-50673923
chrX:97677834-97678112
chrX:110678274-110678561
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr1:179439514-179439808        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr5:149048429-149048718   Identity: 98.97%    E-value: 2.5e-64   Bit-score: 251
This UCNE has 205 paralogous regions in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_166664:4667-4955   Identity: 94.16%    E-value: 2.9e-53   Bit-score: 214.4
Region #2:   scaffold_12318:48366-48625   Identity: 98.08%    E-value: 3.3e-52   Bit-score: 210.9
Region #3:   scaffold_73967:605-893   Identity: 93.13%    E-value: 5.5e-52   Bit-score: 210.2
Region #4:   scaffold_132629:2879-3172   Identity: 90.82%    E-value: 3.6e-50   Bit-score: 204.1
Region #5:   scaffold_65663:9077-9378   Identity: 89.47%    E-value: 6.9e-50   Bit-score: 203.2
Region #6:   scaffold_46587:1354-1645   Identity: 90.41%    E-value: 2.7e-49   Bit-score: 201.3
Region #7:   scaffold_130266:4092-4379   Identity: 90.38%    E-value: 5.3e-49   Bit-score: 200.3
Region #8:   scaffold_2636:6403-6696   Identity: 90.51%    E-value: 7.3e-49   Bit-score: 199.8
Region #9:   scaffold_1118:46003-46284   Identity: 88.66%    E-value: 1.6e-44   Bit-score: 185.4
Region #10:   scaffold_36678:9276-9567   Identity: 85.52%    E-value: 1.4e-41   Bit-score: 175.6
Region #11:   scaffold_167261:3526-3809   Identity: 85.62%    E-value: 3.9e-40   Bit-score: 170.8
Region #12:   scaffold_21134:6514-6796   Identity: 85.27%    E-value: 9.3e-40   Bit-score: 169.6
Region #13:   scaffold_240338:76-344   Identity: 82.88%    E-value: 6e-36   Bit-score: 156.9
Region #14:   scaffold_128193:6083-6371   Identity: 80.89%    E-value: 2e-35   Bit-score: 155.2
Region #15:   scaffold_168652:4143-4412   Identity: 79.31%    E-value: 4.4e-34   Bit-score: 150.7
Region #16:   scaffold_34783:11642-11948   Identity: 78.06%    E-value: 1.1e-33   Bit-score: 149.4
Region #17:   scaffold_40307:6380-6653   Identity: 78.6%    E-value: 8.3e-33   Bit-score: 146.5
Region #18:   scaffold_3610:60278-60547   Identity: 78.38%    E-value: 1.7e-31   Bit-score: 142.1
Region #19:   scaffold_1503:21511-21768   Identity: 78.28%    E-value: 4.6e-31   Bit-score: 140.7
Region #20:   scaffold_8826:16152-16429   Identity: 77.42%    E-value: 1.5e-29   Bit-score: 135.6
Region #21:   scaffold_172012:2828-3025   Identity: 90.45%    E-value: 2.9e-29   Bit-score: 134.7
Region #22:   scaffold_145838:1907-2081   Identity: 91.48%    E-value: 1.4e-26   Bit-score: 125.8
Region #23:   scaffold_130852:1351-1618   Identity: 71.38%    E-value: 1.2e-18   Bit-score: 99.5
Region #24:   scaffold_165333:3331-3489   Identity: 79.38%    E-value: 3.8e-14   Bit-score: 84.5
Region #25:   scaffold_145838:2807-2934   Identity: 87.6%    E-value: 4.8e-14   Bit-score: 84.1
Region #26:   scaffold_42695:46175-46262   Identity: 100%    E-value: 2.8e-12   Bit-score: 78.3
Region #27:   scaffold_164801:2903-3048   Identity: 80.27%    E-value: 3.4e-09   Bit-score: 68.1
This UCNE has 10 paralogous regions in Armadillo

Opossum (monDom5):
Region #1:   chr4:301596172-301596466   Identity: 96.96%    E-value: 1.1e-57   Bit-score: 229.4
Region #2:   chr2:252140736-252141029   Identity: 96.95%    E-value: 7.5e-57   Bit-score: 226.6
This UCNE has 41 paralogous regions in Opossum

Platypus (ornAna1):
Region #1:   Ultra336:151519-151812   Identity: 95.93%    E-value: 2.5e-60   Bit-score: 237.3

Zebra_finch (taeGut1):
Region #1:   chr1:50217981-50218275   Identity: 93.94%    E-value: 2.4e-53   Bit-score: 213.4

Lizard (anoCar2):
Region #1:   chr3:184568700-184569007   Identity: 80.06%    E-value: 2.2e-39   Bit-score: 167.6

Painted_turtle (chrPic1):
Region #1:   JH584512:5459490-5459778   Identity: 95.19%    E-value: 1.8e-52   Bit-score: 211.6

Xenopus (xenTro3):
Region #1:   GL172716:2009333-2009648   Identity: 77.4%    E-value: 5.1e-33   Bit-score: 146.2

Fugu (fr2):
Region #1:   chrUn:371368977-371369261   Identity: 63.3%    E-value: 2.7e-12   Bit-score: 72
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrVII:19842034-19842345   Identity: 60.37%    E-value: 4.9e-09   Bit-score: 61.3

Tetraodon (tetNig2):
This UCNE has 2 paralogous regions in Tetraodon

Zebrafish (danRer7):
Region #1:   chr10:37242376-37242741   Identity: 60.05%    E-value: 6.3e-07   Bit-score: 55.1

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):