UCNE: SOX1_Mauritius
(id = 11686)

General information about the entry
Entry location:intergenic
Position:chr13:112716303-112716579
Length:277 nt
Sequence:SOX1_Mauritius.fasta
Upstream gene:C13orf16
Downstream gene:SOX1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX1_cluster: chr13:112631109-112793888
External links:
CONDOR database:CRCNE00001872;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):uc.357 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr1:144075944-144076221        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr8:12390834-12391110   Identity: 99.28%    E-value: 4.8e-59   Bit-score: 233.4

Armadillo (dasNov1):
Region #1:   scaffold_11451:45272-45380   Identity: 98.17%    E-value: 6.5e-16   Bit-score: 90.3

Opossum (monDom5):
Region #1:   chr7:79620156-79620432   Identity: 98.92%    E-value: 1.5e-54   Bit-score: 218.9

Platypus (ornAna1):
Zebra_finch (taeGut1):
Region #1:   chr1:25393252-25393529   Identity: 98.2%    E-value: 1.4e-56   Bit-score: 224.1

Lizard (anoCar2):
Region #1:   chr3:105283427-105283672   Identity: 86.87%    E-value: 1.3e-37   Bit-score: 161.6

Painted_turtle (chrPic1):
Region #1:   JH584840:996032-996309   Identity: 97.12%    E-value: 2e-56   Bit-score: 224.6

Xenopus (xenTro3):
Region #1:   GL172678:630391-630665   Identity: 93.48%    E-value: 2.2e-49   Bit-score: 200.5

Fugu (fr2):
Region #1:   chrUn:100852894-100853026   Identity: 73.88%    E-value: 0.0000000000012   Bit-score: 73

Medaka (oryLat2):
Region #1:   chr21:11392935-11393119   Identity: 68.82%    E-value: 0.00000000000022   Bit-score: 75.6

Stickleback (gasAcu1):
Region #1:   chrXVI:7110222-7110377   Identity: 72.61%    E-value: 0.000000000000017   Bit-score: 79.4

Tetraodon (tetNig2):
Region #1:   chr2:11122717-11122849   Identity: 74.63%    E-value: 0.00000000000017   Bit-score: 75.8

Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):