UCNE: IRXB_Jonathan
(id = 15015)

General information about the entry
Entry location:intron
Position:chr16:53242087-53242364
Length:278 nt
Sequence:IRXB_Jonathan.fasta
Overlapping gene:CHD9
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): IRXB_cluster: chr16:50493248-55425289
External links:
CONDOR database:CRCNE00007238; CRCNE00007166;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr11:5162212-5162489        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr8:90955158-90955427   Identity: 95.94%    E-value: 9.4e-60   Bit-score: 235.8

Armadillo (dasNov1):
Region #1:   scaffold_34234:3776-4053   Identity: 99.64%    E-value: 2.5e-70   Bit-score: 271.1

Opossum (monDom5):
Region #1:   chr1:443231363-443231643   Identity: 97.15%    E-value: 4.3e-66   Bit-score: 257.3

Platypus (ornAna1):
Region #1:   Contig65:1930801-1931071   Identity: 93.36%    E-value: 3.2e-50   Bit-score: 203.6
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr11:8919561-8919795   Identity: 92.41%    E-value: 3.5e-51   Bit-score: 206.2
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chrLGc:379645-379932   Identity: 89.24%    E-value: 7.2e-60   Bit-score: 235.6

Painted_turtle (chrPic1):
Region #1:   JH584557:4116877-4117154   Identity: 98.2%    E-value: 6.3e-69   Bit-score: 266.2

Xenopus (xenTro3):
Region #1:   GL172919:1062155-1062265   Identity: 72.52%    E-value: 3.5e-06   Bit-score: 57

Fugu (fr2):
Region #1:   chrUn:76659612-76659736   Identity: 68.18%    E-value: 8.7e-07   Bit-score: 53.6

Medaka (oryLat2):
Region #1:   chr3:28798544-28798674   Identity: 68.7%    E-value: 1.2e-07   Bit-score: 56.6

Stickleback (gasAcu1):
Region #1:   chrII:17409190-17409260   Identity: 83.1%    E-value: 3.4e-05   Bit-score: 48.5

Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):