UCNE: IRXB_Logan
(id = 15037)

General information about the entry
Entry location:intron
Position:chr16:53654222-53654631
Length:410 nt
Sequence:IRXB_Logan.fasta
Overlapping gene:RPGRIP1L
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): IRXB_cluster: chr16:50493248-55425289
External links:
CONDOR database:CRCNE00007246; CRCNE00007247;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):uc.402 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr11:4999748-5000158        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr8:91234054-91234463   Identity: 98.78%    E-value: 3.8e-65   Bit-score: 254.2

Armadillo (dasNov1):
Region #1:   scaffold_94626:6244-6653   Identity: 100%    E-value: 3.1e-59   Bit-score: 234.8

Opossum (monDom5):
Region #1:   chr1:443618618-443619028   Identity: 98.54%    E-value: 4.8e-55   Bit-score: 221.1

Platypus (ornAna1):
Region #1:   Contig65:2172891-2173301   Identity: 98.05%    E-value: 1.6e-69   Bit-score: 268.3

Zebra_finch (taeGut1):
Region #1:   chr11:8767944-8768355   Identity: 95.15%    E-value: 6.4e-61   Bit-score: 239.1
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chrLGc:518118-518529   Identity: 93.46%    E-value: 6.9e-61   Bit-score: 239.5

Painted_turtle (chrPic1):
Region #1:   JH584557:3735337-3735744   Identity: 96.82%    E-value: 1.8e-62   Bit-score: 245.3

Xenopus (xenTro3):
Region #1:   GL172782:1865473-1865848   Identity: 72.87%    E-value: 3.4e-26   Bit-score: 124

Fugu (fr2):
Region #1:   chrUn:76710248-76710617   Identity: 69.79%    E-value: 2.4e-30   Bit-score: 132.4

Medaka (oryLat2):
Region #1:   chr3:28727118-28727489   Identity: 71.01%    E-value: 1.1e-27   Bit-score: 123.7

Stickleback (gasAcu1):
Region #1:   chrII:17362671-17363032   Identity: 72.55%    E-value: 1.5e-30   Bit-score: 133.3

Tetraodon (tetNig2):
Region #1:   chr5:754046-754420   Identity: 68.97%    E-value: 2.9e-29   Bit-score: 128.8

Zebrafish (danRer7):
Region #1:   chr7:37751739-37752079   Identity: 66.57%    E-value: 1.2e-10   Bit-score: 68

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):