UCNE: IRXB_Ruby
(id = 15106)

General information about the entry
Entry location:intergenic
Position:chr16:54323656-54324069
Length:414 nt
Sequence:IRXB_Ruby.fasta
Upstream gene:IRX3
Downstream gene:IRX5
Paralogs:chr16:55223385-55223755: IRXB_Vivien;
chr5:2112737-2113109: IRXA_Vivien_1; IRXA_Vivien_2;
chr5:3512687-3513091: IRXA_Ruby;
Ultraconserved Genomic Regulatory Block (UGRB): IRXB_cluster: chr16:50493248-55425289
External links:
CONDOR database:CRCNE00000025;
VISTA Enhancer Browser:hs51;
UCE (Bejerano et al. 2004):uc.403 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr11:4529763-4530176        Identity: >95%
This UCNE has 3 paralogous regions in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr8:91804834-91805247   Identity: 99.03%    E-value: 1.2e-105   Bit-score: 388.8
This UCNE has 3 paralogous regions in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_120:9893-10306   Identity: 99.76%    E-value: 4.3e-96   Bit-score: 357.2
This UCNE has 3 paralogous regions in Armadillo

Opossum (monDom5):
Region #1:   chr1:444354821-444355231   Identity: 98.3%    E-value: 3.3e-96   Bit-score: 357.9
This UCNE has 3 paralogous regions in Opossum

Platypus (ornAna1):
This UCNE has 4 paralogous regions in Platypus

Zebra_finch (taeGut1):
Region #1:   chr11:8382296-8382706   Identity: 97.32%    E-value: 1.8e-95   Bit-score: 353.9
This UCNE has 3 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chrLGc:1092776-1093201   Identity: 89.91%    E-value: 2.4e-84   Bit-score: 317.5
This UCNE has 3 paralogous regions in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584557:3029695-3029759   Identity: 95.38%    E-value: 2.6e-06   Bit-score: 58.8
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172782:2211719-2212127   Identity: 94.13%    E-value: 2.7e-86   Bit-score: 323.7
This UCNE has 3 paralogous regions in Xenopus

Fugu (fr2):
Region #1:   chrUn:76883352-76883765   Identity: 94.69%    E-value: 2.5e-108   Bit-score: 391.5
Region #2:   chrUn:178581471-178581834   Identity: 77.87%    E-value: 4.3e-56   Bit-score: 217.9
This UCNE has 3 paralogous regions in Fugu

Medaka (oryLat2):
Region #1:   chr3:28395529-28395941   Identity: 94.67%    E-value: 4.8e-102   Bit-score: 370.7
Region #2:   chr6:21979423-21979712   Identity: 76.03%    E-value: 2.3e-37   Bit-score: 155.9
This UCNE has 3 paralogous regions in Medaka

Stickleback (gasAcu1):
Region #1:   chrII:17169482-17169894   Identity: 95.16%    E-value: 5.2e-105   Bit-score: 380.7
This UCNE has 3 paralogous regions in Stickleback

Tetraodon (tetNig2):
Region #1:   chr5:935104-935511   Identity: 95.34%    E-value: 9.7e-108   Bit-score: 389.5
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr7:35829998-35830403   Identity: 94.59%    E-value: 2.7e-88   Bit-score: 325.9
Region #2:   chr25:37485035-37485416   Identity: 82.72%    E-value: 1.6e-59   Bit-score: 230.3
This UCNE has 5 paralogous regions in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):