UCNE: LHX1_Frederica
(id = 16132)

General information about the entry
Entry location:intergenic
Position:chr17:35194738-35195149
Length:412 nt
Sequence:LHX1_Frederica.fasta
Upstream gene:MRM1
Downstream gene:LHX1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): LHX1_cluster: chr17:35012232-35590289
External links:
CONDOR database:CRCNE00010946; CRCNE00006523;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr19:8300852-8301264        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr11:84610930-84611342   Identity: 97.34%    E-value: 2.8e-101   Bit-score: 374.3

Armadillo (dasNov1):
Region #1:   scaffold_88037:10188-10599   Identity: 99.03%    E-value: 1.4e-91   Bit-score: 342.2

Opossum (monDom5):
Region #1:   chr2:185604156-185604567   Identity: 98.79%    E-value: 1e-99   Bit-score: 369.5

Platypus (ornAna1):
Region #1:   Ultra9:1090679-1091090   Identity: 98.3%    E-value: 2.7e-101   Bit-score: 373.9

Zebra_finch (taeGut1):
Region #1:   chr19:10049689-10050100   Identity: 98.06%    E-value: 1.7e-97   Bit-score: 360.6

Lizard (anoCar2):
Region #1:   chrUn_GL343439:542663-543165   Identity: 73.41%    E-value: 5.1e-57   Bit-score: 226.6

Painted_turtle (chrPic1):
Xenopus (xenTro3):
Region #1:   GL173152:742141-742564   Identity: 92.45%    E-value: 2.4e-85   Bit-score: 320.5

Fugu (fr2):
Region #1:   chrUn:308915737-308915816   Identity: 82.72%    E-value: 3.2e-08   Bit-score: 58.9

Medaka (oryLat2):
Region #1:   chr13:29135412-29135949   Identity: 61.25%    E-value: 3.8e-31   Bit-score: 135.2

Stickleback (gasAcu1):
Region #1:   chrI:19167346-19167871   Identity: 63.83%    E-value: 9.2e-41   Bit-score: 167.2

Tetraodon (tetNig2):
Region #1:   chr16:8815217-8815496   Identity: 74.2%    E-value: 1.5e-32   Bit-score: 139.8

Zebrafish (danRer7):
Region #1:   chr15:27161424-27161893   Identity: 72.4%    E-value: 6.1e-53   Bit-score: 208.4

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):