UCNE: LHX1_Kazuki
(id = 16143)

General information about the entry
Entry location:intergenic
Position:chr17:35301604-35301902
Length:299 nt
Sequence:LHX1_Kazuki.fasta
Upstream gene:LHX1
Downstream gene:AATF
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): LHX1_cluster: chr17:35012232-35590289
External links:
CONDOR database:CRCNE00011002; CRCNE00006541; CRCNE00006525;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr19:8351503-8351803        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr11:84517988-84518285   Identity: 97.99%    E-value: 5.3e-41   Bit-score: 173.6

Armadillo (dasNov1):
Region #1:   scaffold_36937:47877-48174   Identity: 99%    E-value: 6.4e-37   Bit-score: 160.2

Opossum (monDom5):
Region #1:   chr2:185806017-185806314   Identity: 98.66%    E-value: 2e-33   Bit-score: 148.9

Platypus (ornAna1):
Region #1:   Ultra9:974518-974816   Identity: 98%    E-value: 1.6e-46   Bit-score: 191.5

Zebra_finch (taeGut1):
Region #1:   chr19:10114631-10114930   Identity: 97.34%    E-value: 1.1e-41   Bit-score: 174.8

Lizard (anoCar2):
Region #1:   chrUn_GL343439:342217-342550   Identity: 82.99%    E-value: 1.9e-34   Bit-score: 151.2

Painted_turtle (chrPic1):
Region #1:   JH584693:3004384-3004683   Identity: 97.67%    E-value: 2.3e-39   Bit-score: 168.1

Xenopus (xenTro3):
Region #1:   GL173152:531418-531719   Identity: 86.97%    E-value: 9.5e-30   Bit-score: 135.4

Fugu (fr2):
Region #1:   chrUn:308867556-308867836   Identity: 74.49%    E-value: 6.2e-26   Bit-score: 117.3

Medaka (oryLat2):
Region #1:   chr13:29281618-29281878   Identity: 69.21%    E-value: 7.8e-15   Bit-score: 80.6

Stickleback (gasAcu1):
Region #1:   chrI:19051472-19051757   Identity: 77.18%    E-value: 7.2e-27   Bit-score: 120.6

Tetraodon (tetNig2):
Region #1:   chr16:8775919-8776199   Identity: 76.53%    E-value: 1.7e-27   Bit-score: 122.5

Zebrafish (danRer7):
Region #1:   chr15:27051865-27052158   Identity: 83.17%    E-value: 9.8e-22   Bit-score: 104.3

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):