UCNE: MSI2_Patricia
(id = 16459)

General information about the entry
Entry location:UTR
Position:chr17:56082225-56082438
Length:214 nt
Sequence:MSI2_Patricia.fasta
Overlapping gene:SFRS1
Paralogs:chr1:198461956-198462137
chr6:145602281-145602431
Ultraconserved Genomic Regulatory Block (UGRB): MSI2_cluster: chr17:55483958-56082438
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):uc.418 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr19:8669560-8669774        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr11:88049942-88050155   Identity: 99.53%    E-value: 3.7e-50   Bit-score: 203.5

Armadillo (dasNov1):
Region #1:   scaffold_184490:3290-3427   Identity: 72.48%    E-value: 6.1e-07   Bit-score: 60.1

Opossum (monDom5):
Region #1:   chr2:174831578-174831793   Identity: 98.61%    E-value: 4.7e-44   Bit-score: 183.7
This UCNE has 3 paralogous regions in Opossum

Platypus (ornAna1):
Region #1:   Contig6226:3295-3508   Identity: 98.6%    E-value: 2.3e-46   Bit-score: 190.4

Zebra_finch (taeGut1):
Region #1:   chr19:10447186-10447396   Identity: 96.68%    E-value: 5.4e-44   Bit-score: 181.9

Lizard (anoCar2):
Region #1:   chrUn_GL344193:33993-34204   Identity: 95.75%    E-value: 2.1e-43   Bit-score: 180.5

Painted_turtle (chrPic1):
Region #1:   JH584693:3797592-3797799   Identity: 97.6%    E-value: 1e-41   Bit-score: 175.4

Xenopus (xenTro3):
Region #1:   GL173152:129967-130159   Identity: 84.76%    E-value: 1.6e-29   Bit-score: 134.1

Fugu (fr2):
Region #1:   chrUn:280225727-280225883   Identity: 68.64%    E-value: 4.4e-08   Bit-score: 57.5

Medaka (oryLat2):
Region #1:   chr13:9500514-9500675   Identity: 67.42%    E-value: 7.5e-07   Bit-score: 53.5

Stickleback (gasAcu1):
Tetraodon (tetNig2):
Region #1:   chr16:3851206-3851362   Identity: 69.23%    E-value: 1.5e-08   Bit-score: 59.1

Zebrafish (danRer7):
Region #1:   chr21:38404988-38405181   Identity: 75%    E-value: 1.7e-15   Bit-score: 83.1

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):