UCNE: TSHZ1_Sebastian
(id = 17711)

General information about the entry
Entry location:intron
Position:chr18:72716886-72717254
Length:369 nt
Sequence:TSHZ1_Sebastian.fasta
Overlapping gene:ZNF407
Paralogs:chr20:51110045-51110163
Ultraconserved Genomic Regulatory Block (UGRB): TSHZ1_cluster: chr18:72348362-73931585
External links:
CONDOR database:CRCNE00008786; CRCNE00011556; CRCNE00008787; CRCNE00011557;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:93865301-93865669        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr18:84256653-84257019   Identity: 95.39%    E-value: 5e-79   Bit-score: 300.2

Armadillo (dasNov1):
Region #1:   scaffold_1298:86181-86549   Identity: 96.75%    E-value: 1.7e-77   Bit-score: 295.3
Region #2:   scaffold_62079:8964-9332   Identity: 96.75%    E-value: 1.7e-77   Bit-score: 295.3

Opossum (monDom5):
Region #1:   chr3:303209121-303209489   Identity: 97.56%    E-value: 5.7e-79   Bit-score: 300.4
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra88:641948-642301   Identity: 90.68%    E-value: 1.7e-64   Bit-score: 251.5
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:96934371-96934739   Identity: 96.48%    E-value: 1e-78   Bit-score: 298.1

Lizard (anoCar2):
Region #1:   chr4:49608897-49609265   Identity: 95.12%    E-value: 1.1e-80   Bit-score: 305.1
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584442:9084356-9084724   Identity: 96.48%    E-value: 7.5e-80   Bit-score: 302.9
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Fugu (fr2):
Region #1:   chrUn:207633827-207634132   Identity: 77.6%    E-value: 6.1e-45   Bit-score: 180.7
Region #2:   chrUn:370521329-370521633   Identity: 77.6%    E-value: 3.5e-44   Bit-score: 178.2
Region #3:   chrUn:203617975-203618264   Identity: 77.59%    E-value: 8.3e-44   Bit-score: 177
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   ultracontig182:2727949-2728241   Identity: 78.23%    E-value: 1.2e-41   Bit-score: 170
Region #2:   chr11:6669719-6670015   Identity: 78.41%    E-value: 5.7e-39   Bit-score: 161
Region #3:   chr7:25077767-25077866   Identity: 82%    E-value: 8.6e-12   Bit-score: 70.8

Stickleback (gasAcu1):
Region #1:   chrXX:4739523-4739812   Identity: 78.97%    E-value: 2.1e-43   Bit-score: 175.9
Region #2:   chrX:5487772-5488042   Identity: 80.88%    E-value: 1.1e-40   Bit-score: 166.8
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr21:2098036-2098346   Identity: 76.21%    E-value: 5.6e-43   Bit-score: 174.2
Region #2:   chrUn_random:41963249-41963414   Identity: 86.75%    E-value: 1.9e-31   Bit-score: 135.9
Region #3:   chr9:9820283-9820382   Identity: 82%    E-value: 4.7e-13   Bit-score: 74.8

Zebrafish (danRer7):
Region #1:   chr19:21631508-21631846   Identity: 75.81%    E-value: 3.9e-39   Bit-score: 162.4
Region #2:   chr23:38794491-38794596   Identity: 79.25%    E-value: 2.4e-09   Bit-score: 63.5

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):