UCNE: TSHZ1_Nora
(id = 17777)

General information about the entry
Entry location:UTR
Position:chr18:72980010-72980673
Length:664 nt
Sequence:TSHZ1_Nora.fasta
Overlapping gene:TSHZ1
Paralogs:chr19:31798575-31798943: TSHZ3_Nora;
Ultraconserved Genomic Regulatory Block (UGRB): TSHZ1_cluster: chr18:72348362-73931585
External links:
CONDOR database:CRCNE00011578; CRCNE00008806; CRCNE00008807; CRCNE00011579; CRCNE00008808; CRCNE00011580;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:93696364-93697030        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr18:84031154-84031819   Identity: 93.4%    E-value: 4.4e-153   Bit-score: 547
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_76394:11108-11693   Identity: 93.17%    E-value: 1.1e-122   Bit-score: 446.2
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr3:303605964-303606627   Identity: 95.93%    E-value: 3.4e-146   Bit-score: 524.6
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra88:549835-550497   Identity: 91.18%    E-value: 7.7e-148   Bit-score: 529.2
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:96756441-96757106   Identity: 95.5%    E-value: 1.5e-153   Bit-score: 547.5
This UCNE has 2 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chr4:49872416-49873077   Identity: 91.09%    E-value: 3.9e-145   Bit-score: 520.1
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584442:8829757-8830421   Identity: 95.34%    E-value: 2.7e-157   Bit-score: 561
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:207580374-207580779   Identity: 67.48%    E-value: 5.2e-36   Bit-score: 151.9
Region #2:   chrUn:203543405-203543715   Identity: 68.57%    E-value: 4.8e-26   Bit-score: 118.8
Region #3:   chrUn:203543848-203543967   Identity: 77.5%    E-value: 2e-12   Bit-score: 73.6
This UCNE has 2 paralogous regions in Fugu

Medaka (oryLat2):
Region #1:   ultracontig182:2525241-2525720   Identity: 65.9%    E-value: 5.3e-39   Bit-score: 162
Region #2:   chr11:6562626-6563008   Identity: 69.57%    E-value: 3.8e-37   Bit-score: 155.8
This UCNE has 2 paralogous regions in Medaka

Stickleback (gasAcu1):
Region #1:   chrX:5426215-5426618   Identity: 66.91%    E-value: 6.1e-35   Bit-score: 148.6
Region #2:   chrXX:4654247-4654556   Identity: 65.16%    E-value: 6.6e-23   Bit-score: 108.6
Region #3:   chrXX:4654705-4654849   Identity: 73.1%    E-value: 2.8e-13   Bit-score: 76.6
This UCNE has 2 paralogous regions in Stickleback

Tetraodon (tetNig2):
Region #1:   chr21:2049819-2050204   Identity: 68.11%    E-value: 9.1e-36   Bit-score: 151.1
Region #2:   chr8:2874959-2875266   Identity: 68.49%    E-value: 5.4e-27   Bit-score: 122
Region #3:   chr8:2875393-2875512   Identity: 78.33%    E-value: 6.1e-13   Bit-score: 75.3
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr19:21881902-21882326   Identity: 77.99%    E-value: 3.1e-60   Bit-score: 233.3
This UCNE has 2 paralogous regions in Zebrafish

Lamprey (petMar1):
This UCNE has 1 paralogous region in Lamprey

Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):