UCNE: TSHZ1_Laura
(id = 17833)

General information about the entry
Entry location:intergenic
Position:chr18:73857692-73857975
Length:284 nt
Sequence:TSHZ1_Laura.fasta
Upstream gene:C18orf62
Downstream gene:ZNF516
Paralogs:chr19:31353632-31353875: TSHZ3_Laura;
chr20:52103835-52103941
Ultraconserved Genomic Regulatory Block (UGRB): TSHZ1_cluster: chr18:72348362-73931585
External links:
CONDOR database:CRCNE00008819;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:93311870-93312154        Identity: >95%
This UCNE has 3 paralogous regions in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr18:83185801-83186085   Identity: 93.73%    E-value: 2e-55   Bit-score: 221.4
This UCNE has 2 paralogous regions in Mouse

Armadillo (dasNov1):
This UCNE has 2 paralogous regions in Armadillo

Opossum (monDom5):
Region #1:   chr3:304962634-304962916   Identity: 96.47%    E-value: 6.5e-54   Bit-score: 216.8
This UCNE has 2 paralogous regions in Opossum

Platypus (ornAna1):
Region #1:   Ultra88:402772-403051   Identity: 91.17%    E-value: 1.3e-50   Bit-score: 205
This UCNE has 2 paralogous regions in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:96377890-96378170   Identity: 95.73%    E-value: 4.5e-59   Bit-score: 232.4
This UCNE has 2 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chr4:50486125-50486408   Identity: 94.72%    E-value: 1.6e-60   Bit-score: 237.8
This UCNE has 2 paralogous regions in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584442:8248232-8248513   Identity: 96.1%    E-value: 7.9e-59   Bit-score: 232.7
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:203466574-203466838   Identity: 82.09%    E-value: 2.3e-45   Bit-score: 181.8
Region #2:   chrUn:360844083-360844249   Identity: 77.46%    E-value: 7e-21   Bit-score: 100.5
This UCNE has 2 paralogous regions in Fugu

Medaka (oryLat2):
Region #1:   ultracontig182:2340380-2340526   Identity: 77.33%    E-value: 3.3e-15   Bit-score: 81.7
Region #2:   chr11:6435631-6435768   Identity: 76.55%    E-value: 4.1e-15   Bit-score: 81.4
Region #3:   chr7:24887708-24887872   Identity: 71.52%    E-value: 1.2e-12   Bit-score: 73.2
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrXX:4561178-4561443   Identity: 81.92%    E-value: 4.3e-42   Bit-score: 171.1
Region #2:   chrX:5381745-5381882   Identity: 80.14%    E-value: 7.6e-18   Bit-score: 90.6
This UCNE has 2 paralogous regions in Stickleback

Tetraodon (tetNig2):
Region #1:   chrUn_random:62486775-62487039   Identity: 82.46%    E-value: 6.3e-47   Bit-score: 187
Region #2:   chrUn_random:50199420-50199605   Identity: 74.09%    E-value: 9.5e-21   Bit-score: 100
Region #3:   chr21:1993169-1993308   Identity: 81.43%    E-value: 3.5e-19   Bit-score: 94.8
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr19:22117402-22117672   Identity: 78.6%    E-value: 3.7e-31   Bit-score: 135.6
This UCNE has 2 paralogous regions in Zebrafish

Lamprey (petMar1):
This UCNE has 1 paralogous region in Lamprey

Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):