UCNE: TSHZ3_Nora
(id = 18313)

General information about the entry
Entry location:intron
Position:chr19:31798662-31799051
Length:390 nt
Sequence:TSHZ3_Nora.fasta
Overlapping gene:TSHZ3
Paralogs:chr18:72980223-72980471: TSHZ1_Nora;
Ultraconserved Genomic Regulatory Block (UGRB): TSHZ3_cluster: chr19:30379760-32757968
External links:
CONDOR database:CRCNE00011621; CRCNE00007698;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr11:9923080-9923469        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr7:36739168-36739556   Identity: 97.18%    E-value: 1.9e-89   Bit-score: 334.9
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_36206:7476-7865   Identity: 99.49%    E-value: 9.2e-83   Bit-score: 312.9
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr1:430155425-430155814   Identity: 96.67%    E-value: 2.4e-86   Bit-score: 325
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra517:3403976-3404365   Identity: 96.92%    E-value: 2.7e-86   Bit-score: 324
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr11:15508615-15509004   Identity: 97.18%    E-value: 2.4e-85   Bit-score: 320.2
This UCNE has 2 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343299:257388-257778   Identity: 94.13%    E-value: 2.1e-84   Bit-score: 317.6
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584557:12906584-12906971   Identity: 97.16%    E-value: 3.4e-85   Bit-score: 320.7
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172730:1775643-1776050   Identity: 88.48%    E-value: 2e-70   Bit-score: 270.9

Fugu (fr2):
Region #1:   chrUn:7507511-7507768   Identity: 70.77%    E-value: 3.1e-25   Bit-score: 115.4
Region #2:   chrUn:189764399-189764494   Identity: 76.04%    E-value: 5.1e-08   Bit-score: 58.2
This UCNE has 3 paralogous regions in Fugu

Medaka (oryLat2):
Region #1:   chr6:25915488-25915750   Identity: 69.43%    E-value: 7e-22   Bit-score: 104.4
Region #2:   chr3:35629024-35629267   Identity: 63.11%    E-value: 7.1e-10   Bit-score: 64.5
This UCNE has 2 paralogous regions in Medaka

Stickleback (gasAcu1):
Region #1:   chrXIX:17669953-17670230   Identity: 65.11%    E-value: 2.1e-18   Bit-score: 92.9
Region #2:   chrII:1606930-1607023   Identity: 79.79%    E-value: 6.5e-09   Bit-score: 61.3
This UCNE has 3 paralogous regions in Stickleback

Tetraodon (tetNig2):
Region #1:   chr13:7077640-7077896   Identity: 70.66%    E-value: 3.5e-24   Bit-score: 111.9
Region #2:   chrUn_random:39919918-39920013   Identity: 78.12%    E-value: 9.5e-09   Bit-score: 60.6
This UCNE has 2 paralogous regions in Tetraodon

Zebrafish (danRer7):
Region #1:   chr18:14321741-14322018   Identity: 69.26%    E-value: 3.1e-22   Bit-score: 106.3
Region #2:   chr7:48355849-48356123   Identity: 62.5%    E-value: 3e-12   Bit-score: 73.2
This UCNE has 1 paralogous region in Zebrafish

Lamprey (petMar1):
This UCNE has 1 paralogous region in Lamprey

Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):