UCNE: HOXD_Alice
(id = 21249)

General information about the entry
Entry location:intergenic
Position:chr2:176147493-176147954
Length:462 nt
Sequence:HOXD_Alice.fasta
Upstream gene:ATP5G3
Downstream gene:KIAA1715
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): HOXD_cluster: chr2:175967909-178084536
External links:
CONDOR database:CRCNE00010471; CRCNE00010472; CRCNE00010473;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr7:17744893-17745354        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr2:73998975-73999435   Identity: 95.67%    E-value: 3.8e-92   Bit-score: 344.1

Armadillo (dasNov1):
Region #1:   scaffold_5859:54886-55346   Identity: 97.62%    E-value: 2.3e-86   Bit-score: 325.1

Opossum (monDom5):
Region #1:   chr4:186426909-186427369   Identity: 94.59%    E-value: 2.6e-75   Bit-score: 288.6

Platypus (ornAna1):
Region #1:   Ultra514:14196830-14197290   Identity: 94.81%    E-value: 3.7e-90   Bit-score: 337.1
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr7:16684790-16685171   Identity: 92.43%    E-value: 6e-67   Bit-score: 259.3

Lizard (anoCar2):
Region #1:   chrUn_GL343377:248011-248470   Identity: 90.67%    E-value: 4.2e-85   Bit-score: 320.1

Painted_turtle (chrPic1):
Region #1:   JH584712:1636247-1636706   Identity: 95.23%    E-value: 2.6e-86   Bit-score: 324.7

Xenopus (xenTro3):
Region #1:   GL172799:1081798-1082246   Identity: 85.78%    E-value: 1.4e-68   Bit-score: 265

Fugu (fr2):
Region #1:   chrUn:173346704-173347117   Identity: 61.89%    E-value: 4.6e-24   Bit-score: 111.7

Medaka (oryLat2):
Region #1:   chr21:24448985-24449185   Identity: 69.42%    E-value: 4.5e-14   Bit-score: 78.7
Region #2:   chr21:24448769-24448918   Identity: 70.25%    E-value: 2.1e-09   Bit-score: 63.2

Stickleback (gasAcu1):
Region #1:   chrXVI:9921330-9921788   Identity: 62.55%    E-value: 1.8e-27   Bit-score: 123.3

Tetraodon (tetNig2):
Region #1:   chr2:13529277-13529691   Identity: 60.69%    E-value: 5.9e-20   Bit-score: 98.1

Zebrafish (danRer7):
Region #1:   chr9:2301986-2302423   Identity: 59.49%    E-value: 9.4e-13   Bit-score: 75.1

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Region #1:   Scaffold43190:5-179   Identity: 96%    E-value: 6.5e-29   Bit-score: 132.4

Lancelet (braFlo1):