UCNE: HOXD_Ruby
(id = 21365)

General information about the entry
Entry location:intergenic
Position:chr2:177716309-177716650
Length:342 nt
Sequence:HOXD_Ruby.fasta
Upstream gene:MTX2
Downstream gene:HNRNPA3
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): HOXD_cluster: chr2:175967909-178084536
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr7:17078865-17079207        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr2:75352455-75352798   Identity: 95.64%    E-value: 1.3e-59   Bit-score: 235.6

Armadillo (dasNov1):
Region #1:   scaffold_44661:3061-3402   Identity: 98.54%    E-value: 1.6e-57   Bit-score: 228.8

Opossum (monDom5):
Region #1:   chr4:188512873-188513214   Identity: 99.42%    E-value: 1.9e-58   Bit-score: 232.1

Platypus (ornAna1):
Region #1:   Ultra514:15274015-15274354   Identity: 97.65%    E-value: 2.8e-66   Bit-score: 257.3

Zebra_finch (taeGut1):
Region #1:   chr7:17403808-17404146   Identity: 97.64%    E-value: 7.1e-63   Bit-score: 245.3

Lizard (anoCar2):
Region #1:   chrUn_GL343411:781267-781607   Identity: 89.15%    E-value: 6.3e-56   Bit-score: 222.8

Painted_turtle (chrPic1):
Region #1:   JH584712:2645775-2646113   Identity: 97.05%    E-value: 3.1e-61   Bit-score: 240.9

Xenopus (xenTro3):
Region #1:   GL172799:223229-223565   Identity: 85.46%    E-value: 6.3e-46   Bit-score: 189.3

Fugu (fr2):
Region #1:   chrUn:173173285-173173591   Identity: 70.55%    E-value: 6.6e-30   Bit-score: 130.7

Medaka (oryLat2):
Region #1:   chr21:24723154-24723454   Identity: 70.96%    E-value: 2e-26   Bit-score: 119.3

Stickleback (gasAcu1):
Region #1:   chrXVI:9730112-9730451   Identity: 71.55%    E-value: 1.6e-32   Bit-score: 139.5

Tetraodon (tetNig2):
Region #1:   chr2:13357481-13357825   Identity: 70.49%    E-value: 5e-33   Bit-score: 141.1

Zebrafish (danRer7):
Region #1:   chr9:1763203-1763402   Identity: 71.29%    E-value: 2.3e-10   Bit-score: 66.7

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):