UCNE: HOXD_Ursula
(id = 21384)

General information about the entry
Entry location:UTR
Position:chr2:178084115-178084536
Length:422 nt
Sequence:HOXD_Ursula.fasta
Overlapping gene:HNRNPA3
Paralogs:chr1:54440283-54440630
chr1:65591561-65591701
chr1:81893308-81893708
chr1:113993366-113993768
chr10:44284281-44284686
chr11:32612949-32613322
chr12:52105830-52106235
chr13:66361678-66362053
chr15:57538783-57539146
chr18:48342434-48342832
chr19:54534769-54535020
chr2:197880750-197881149
chr2:217039212-217039602
chr4:83050820-83051217
chr6:25272049-25272417
chr6:48116236-48116595
chrX:139115653-139116029
Ultraconserved Genomic Regulatory Block (UGRB): HOXD_cluster: chr2:175967909-178084536
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr7:16931742-16932165        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr2:75665378-75665799   Identity: 99.76%    E-value: 1.5e-80   Bit-score: 305.4
This UCNE has 113 paralogous regions in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_3768:43930-44332   Identity: 98.76%    E-value: 3.9e-65   Bit-score: 254.4
Region #2:   scaffold_144164:2996-3373   Identity: 98.94%    E-value: 4.9e-61   Bit-score: 240.8
Region #3:   scaffold_68229:1126-1490   Identity: 95.96%    E-value: 1.1e-55   Bit-score: 223
Region #4:   scaffold_5280:41638-42040   Identity: 90.64%    E-value: 1.3e-53   Bit-score: 216.1
Region #5:   scaffold_124652:398-793   Identity: 89.93%    E-value: 1e-51   Bit-score: 209.8
Region #6:   scaffold_217148:1642-2039   Identity: 89%    E-value: 3.6e-50   Bit-score: 204.7
Region #7:   scaffold_7758:37759-38129   Identity: 87.37%    E-value: 2.1e-44   Bit-score: 185.6
Region #8:   scaffold_187239:4234-4484   Identity: 88.54%    E-value: 1.1e-27   Bit-score: 130
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chrUn:83770317-83770737   Identity: 99.53%    E-value: 5.3e-68   Bit-score: 264.2
This UCNE has 16 paralogous regions in Opossum

Platypus (ornAna1):
Region #1:   Ultra514:15493097-15493519   Identity: 99.29%    E-value: 1.4e-86   Bit-score: 325

Zebra_finch (taeGut1):
Region #1:   chr7:17546119-17546542   Identity: 94.87%    E-value: 8.7e-71   Bit-score: 271.9

Lizard (anoCar2):
Region #1:   chrUn_GL343411:540377-540782   Identity: 87.44%    E-value: 3.9e-57   Bit-score: 227.1

Painted_turtle (chrPic1):
Region #1:   JH584712:2869550-2869731   Identity: 96.24%    E-value: 6.5e-28   Bit-score: 130.6
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172799:39359-39764   Identity: 85.34%    E-value: 4.6e-51   Bit-score: 206.7

Fugu (fr2):
Region #1:   chrUn:173151841-173151945   Identity: 87.39%    E-value: 3.2e-13   Bit-score: 75.6

Medaka (oryLat2):
Region #1:   chr21:24754380-24754807   Identity: 60.18%    E-value: 2.1e-13   Bit-score: 76.3

Stickleback (gasAcu1):
Region #1:   chrXVI:9703640-9703779   Identity: 74.65%    E-value: 8e-09   Bit-score: 61.2

Tetraodon (tetNig2):
Region #1:   chr2:13337409-13337513   Identity: 86.49%    E-value: 3.3e-12   Bit-score: 72.2

Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):