UCNE: TSHZ2_Leontina
(id = 22449)

General information about the entry
Entry location:intergenic
Position:chr20:52104687-52104917
Length:231 nt
Sequence:TSHZ2_Leontina.fasta
Upstream gene:TSHZ2
Downstream gene:ZNF217
Paralogs:chr1:59924229-59924422
chr12:79225967-79226130
chr12:117020917-117021107
chr13:51467492-51467693
chr13:108193176-108193387
chr15:96837627-96837824
chr16:55130454-55130644
chr16:73923737-73923924
chr16:79006124-79006324
chr17:33165102-33165295
chr17:71445439-71445569
chr18:44634246-44634354
chr18:50929814-50930006
chr18:72957010-72957135
chr18:76371722-76371934
chr19:30110296-30110460
chr2:53147963-53148123
chr2:77500224-77500395
chr2:115392809-115393030
chr2:221127218-221127407
chr20:39392852-39392963
chr3:59783403-59783608
chr3:66320810-66321005
chr4:141147584-141147792
chr5:105373192-105373391
chr7:68469512-68469729
chr9:14118945-14119127
Ultraconserved Genomic Regulatory Block (UGRB): TSHZ2_cluster: chr20:50980751-52105849
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr20:12560831-12561061        Identity: >95%
This UCNE has 19 paralogous regions in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr2:170071271-170071501   Identity: 99.13%    E-value: 1.4e-34   Bit-score: 151.9
This UCNE has 7 paralogous regions in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_139:211242-211469   Identity: 99.12%    E-value: 2.3e-30   Bit-score: 138
Region #2:   scaffold_139:211269-211476   Identity: 76.64%    E-value: 1.5e-11   Bit-score: 75.6
This UCNE has 7 paralogous regions in Armadillo

Opossum (monDom5):
Region #1:   chr1:491851196-491851426   Identity: 98.7%    E-value: 8.5e-30   Bit-score: 136.4
This UCNE has 7 paralogous regions in Opossum

Platypus (ornAna1):
Region #1:   Ultra516:4470288-4470518   Identity: 99.13%    E-value: 4.2e-41   Bit-score: 173.1
This UCNE has 26 paralogous regions in Platypus

Zebra_finch (taeGut1):
Region #1:   chr20:13796397-13796627   Identity: 98.7%    E-value: 3.4e-36   Bit-score: 156.1
This UCNE has 14 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343226:301467-301698   Identity: 95.28%    E-value: 8e-35   Bit-score: 152.1
This UCNE has 9 paralogous regions in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584481:1181238-1181468   Identity: 97.84%    E-value: 7.4e-35   Bit-score: 152.7
This UCNE has 29 paralogous regions in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL173004:1141939-1142153   Identity: 64.68%    E-value: 1.2e-05   Bit-score: 54.9
This UCNE has 2 paralogous regions in Xenopus

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):