UCNE: ZIC1_Ava
(id = 24554)

General information about the entry
Entry location:intergenic
Position:chr3:147009767-147010016
Length:250 nt
Sequence:ZIC1_Ava.fasta
Upstream gene:PLSCR5
Downstream gene:ZIC4
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): ZIC1_cluster: chr3:146465402-148087313
External links:
CONDOR database:CRCNE00005717;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:12915030-12915277        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr9:91484576-91484824   Identity: 96.4%    E-value: 4.7e-46   Bit-score: 190.1

Armadillo (dasNov1):
Region #1:   scaffold_4775:68705-68955   Identity: 96.41%    E-value: 8.8e-45   Bit-score: 186

Opossum (monDom5):
Region #1:   chr7:211898204-211898480   Identity: 87.41%    E-value: 1.8e-39   Bit-score: 168.7

Platypus (ornAna1):
Region #1:   chr1:38674430-38674676   Identity: 97.18%    E-value: 2.2e-49   Bit-score: 200.7

Zebra_finch (taeGut1):
Region #1:   chr9:13377875-13378121   Identity: 94.38%    E-value: 7e-44   Bit-score: 181.8

Lizard (anoCar2):
Region #1:   chrUn_GL343435:746108-746376   Identity: 82.53%    E-value: 1.4e-39   Bit-score: 168

Painted_turtle (chrPic1):
Region #1:   JH584745:3535247-3535508   Identity: 91.6%    E-value: 4.7e-43   Bit-score: 180.1

Xenopus (xenTro3):
Region #1:   GL172920:1146675-1146917   Identity: 75.81%    E-value: 1.1e-21   Bit-score: 108.3

Fugu (fr2):
Region #1:   chrUn:210602072-210602191   Identity: 75.41%    E-value: 5.8e-10   Bit-score: 64

Medaka (oryLat2):
Region #1:   chr20:16800448-16800631   Identity: 66.67%    E-value: 3e-09   Bit-score: 61.8

Stickleback (gasAcu1):
Region #1:   chrXXI:8398027-8398259   Identity: 67.37%    E-value: 2.4e-15   Bit-score: 82.1

Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr24:5089527-5089700   Identity: 71.19%    E-value: 3.2e-08   Bit-score: 59.2

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):