UCNE: SOX2_Aida
(id = 24960)

General information about the entry
Entry location:intergenic
Position:chr3:180461919-180462709
Length:791 nt
Sequence:SOX2_Aida.fasta
Upstream gene:CCDC39
Downstream gene:FXR1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:
VISTA Enhancer Browser:hs655;
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18295270-18296062        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:33905276-33906062   Identity: 94.83%    E-value: 1.6e-168   Bit-score: 598.6

Armadillo (dasNov1):
Region #1:   scaffold_1307:149185-149975   Identity: 98.61%    E-value: 1.7e-170   Bit-score: 605.3

Opossum (monDom5):
Region #1:   chr7:203916135-203916918   Identity: 94.9%    E-value: 4.9e-156   Bit-score: 557.5

Platypus (ornAna1):
Region #1:   Contig8344:10527-11316   Identity: 97.98%    E-value: 1.8e-187   Bit-score: 661.1

Zebra_finch (taeGut1):
Region #1:   chr9:19652757-19653545   Identity: 97.21%    E-value: 5.8e-174   Bit-score: 615.6

Lizard (anoCar2):
Region #1:   chr3:1565464-1566251   Identity: 93.91%    E-value: 2.6e-170   Bit-score: 603.9

Painted_turtle (chrPic1):
Region #1:   JH584502:3085152-3085300   Identity: 94.63%    E-value: 4.4e-24   Bit-score: 118.7

Xenopus (xenTro3):
Region #1:   GL172881:1444282-1445070   Identity: 93.93%    E-value: 6.6e-158   Bit-score: 562.5

Fugu (fr2):
Region #1:   chrUn:303412708-303413045   Identity: 63.01%    E-value: 3.8e-20   Bit-score: 99.5

Medaka (oryLat2):
Region #1:   chr4:20010982-20011725   Identity: 68.49%    E-value: 1.8e-71   Bit-score: 270.1

Stickleback (gasAcu1):
Region #1:   chrVIII:6053272-6053986   Identity: 64.23%    E-value: 1.4e-58   Bit-score: 227.4

Tetraodon (tetNig2):
Region #1:   chr1:21736176-21736831   Identity: 65.74%    E-value: 6.7e-59   Bit-score: 228.2
Region #2:   chrUn_random:50182808-50183384   Identity: 64.96%    E-value: 1.3e-45   Bit-score: 184.1

Zebrafish (danRer7):
Region #1:   chr22:40561107-40561828   Identity: 74.3%    E-value: 3.1e-84   Bit-score: 313.4
Region #2:   chr22:40563359-40563479   Identity: 77.69%    E-value: 1.2e-09   Bit-score: 65.6

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):