UCNE: SOX2_Aladdin_2
(id = 24964)

General information about the entry
Entry location:UTR
Position:chr3:180694391-180694638
Length:248 nt
Sequence:SOX2_Aladdin_2.fasta
Overlapping gene:FXR1
Paralogs:chr12:42824919-42825164
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18236900-18237157        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34069396-34069639   Identity: 93.25%    E-value: 1.6e-36   Bit-score: 158.5
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_73489:7371-7621   Identity: 91.3%    E-value: 2.1e-32   Bit-score: 144.9
Region #2:   scaffold_8221:26051-26297   Identity: 90.76%    E-value: 9.6e-32   Bit-score: 142.7
Region #3:   scaffold_2857:44956-45062   Identity: 94.5%    E-value: 1.2e-09   Bit-score: 69.3

Opossum (monDom5):
Region #1:   chr7:204123133-204123388   Identity: 94.14%    E-value: 2e-34   Bit-score: 151.9

Platypus (ornAna1):
Region #1:   Ultra347:472032-472285   Identity: 94.88%    E-value: 7.3e-41   Bit-score: 172.4
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr9:19589432-19589687   Identity: 92.97%    E-value: 2.9e-37   Bit-score: 159.8

Lizard (anoCar2):
Region #1:   chr3:1479289-1479542   Identity: 91.41%    E-value: 7.7e-39   Bit-score: 165.5

Painted_turtle (chrPic1):
Region #1:   JH584502:3227472-3227728   Identity: 93.39%    E-value: 4.6e-36   Bit-score: 156.9
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172881:1389592-1389836   Identity: 77.91%    E-value: 1.4e-20   Bit-score: 104.6

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr22:40528801-40528967   Identity: 70.88%    E-value: 2.7e-06   Bit-score: 52.8

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):