UCNE: SOX2_Aladdin_3
(id = 24965)

General information about the entry
Entry location:UTR
Position:chr3:180694650-180694849
Length:200 nt
Sequence:SOX2_Aladdin_3.fasta
Overlapping gene:FXR1
Paralogs:chr12:42824708-42824907
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18236690-18236888        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34069652-34069849   Identity: 97.99%    E-value: 3.2e-34   Bit-score: 150.5
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_2857:44755-44942   Identity: 91.88%    E-value: 2.5e-26   Bit-score: 124.4
Region #2:   scaffold_8221:25825-26034   Identity: 80.75%    E-value: 3.6e-19   Bit-score: 100.7
Region #3:   scaffold_73489:7634-7807   Identity: 78.68%    E-value: 2.2e-15   Bit-score: 88.1

Opossum (monDom5):
Region #1:   chr7:204123401-204123600   Identity: 97%    E-value: 1.2e-30   Bit-score: 139
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra347:472298-472498   Identity: 93.63%    E-value: 3e-32   Bit-score: 143.4
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr9:19589222-19589419   Identity: 95%    E-value: 6.8e-32   Bit-score: 141.6

Lizard (anoCar2):
Region #1:   chr3:1479078-1479276   Identity: 90.59%    E-value: 4.4e-30   Bit-score: 136.1

Painted_turtle (chrPic1):
Region #1:   JH584502:3227741-3227940   Identity: 95.5%    E-value: 9.9e-31   Bit-score: 138.8

Xenopus (xenTro3):
Region #1:   GL172881:1389388-1389581   Identity: 84%    E-value: 7.5e-21   Bit-score: 105.2

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):