UCNE: SOX2_Charlie
(id = 24975)

General information about the entry
Entry location:intergenic
Position:chr3:181020674-181021011
Length:338 nt
Sequence:SOX2_Charlie.fasta
Upstream gene:DNAJC19
Downstream gene:SOX2OT
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18155728-18156065        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34312693-34313028   Identity: 89.29%    E-value: 9.2e-57   Bit-score: 226.1

Armadillo (dasNov1):
Region #1:   scaffold_1465:30168-30506   Identity: 98.23%    E-value: 2.3e-64   Bit-score: 251.5

Opossum (monDom5):
Region #1:   chr7:204424471-204424808   Identity: 88.5%    E-value: 1.5e-49   Bit-score: 202.6

Platypus (ornAna1):
Region #1:   Ultra347:653108-653445   Identity: 92.6%    E-value: 1.1e-61   Bit-score: 242.1

Zebra_finch (taeGut1):
Region #1:   chr9:19503248-19503585   Identity: 97.34%    E-value: 5.6e-65   Bit-score: 252.3
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr3:1299362-1299710   Identity: 86.86%    E-value: 7.1e-57   Bit-score: 225.9

Painted_turtle (chrPic1):
Region #1:   JH584502:3390871-3390936   Identity: 95.45%    E-value: 9.1e-05   Bit-score: 53.3

Xenopus (xenTro3):
Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):