UCNE: SOX2_Jacob
(id = 24990)

General information about the entry
Entry location:intergenic
Position:chr3:181176688-181177047
Length:360 nt
Sequence:SOX2_Jacob.fasta
Upstream gene:DNAJC19
Downstream gene:SOX2OT
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18096387-18096747        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34445340-34445682   Identity: 85.3%    E-value: 3.7e-60   Bit-score: 237.5

Armadillo (dasNov1):
Region #1:   scaffold_122306:6050-6409   Identity: 98.61%    E-value: 3.5e-80   Bit-score: 304.2

Opossum (monDom5):
Region #1:   chr7:204585517-204585876   Identity: 88.37%    E-value: 1.9e-65   Bit-score: 255.5

Platypus (ornAna1):
Region #1:   Ultra347:795340-795700   Identity: 95.57%    E-value: 8.5e-79   Bit-score: 298.9

Zebra_finch (taeGut1):
Region #1:   chr9:19445280-19445639   Identity: 94.46%    E-value: 1.3e-74   Bit-score: 284.4
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr3:1171575-1171937   Identity: 92.84%    E-value: 2.5e-74   Bit-score: 284

Painted_turtle (chrPic1):
Region #1:   JH584502:3495894-3496254   Identity: 95.84%    E-value: 1.1e-77   Bit-score: 295.6

Xenopus (xenTro3):
Region #1:   GL172881:1229084-1229404   Identity: 84.24%    E-value: 1.3e-49   Bit-score: 201.6

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr22:40432664-40432960   Identity: 59.53%    E-value: 2.2e-09   Bit-score: 63.6

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):