UCNE: SOX2_Logan_1
(id = 24994)

General information about the entry
Entry location:intergenic
Position:chr3:181278959-181279186
Length:228 nt
Sequence:SOX2_Logan_1.fasta
Upstream gene:DNAJC19
Downstream gene:SOX2OT
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18065067-18065294        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34503938-34504165   Identity: 95.18%    E-value: 4.4e-49   Bit-score: 200

Armadillo (dasNov1):
Region #1:   scaffold_19409:49723-49950   Identity: 100%    E-value: 2.1e-57   Bit-score: 227.8

Opossum (monDom5):
Region #1:   chr7:204667934-204668160   Identity: 95.15%    E-value: 1.1e-55   Bit-score: 222.3

Platypus (ornAna1):
Region #1:   Ultra347:867407-867634   Identity: 98.68%    E-value: 1.6e-58   Bit-score: 230.9

Zebra_finch (taeGut1):
Region #1:   chr9:19415051-19415278   Identity: 93.86%    E-value: 8.8e-52   Bit-score: 207.9

Lizard (anoCar2):
Region #1:   chr3:1119197-1119424   Identity: 94.3%    E-value: 3.2e-55   Bit-score: 219.8

Painted_turtle (chrPic1):
Region #1:   JH584502:3543782-3544009   Identity: 96.05%    E-value: 4.8e-54   Bit-score: 216.5

Xenopus (xenTro3):
Region #1:   GL172881:1200362-1200573   Identity: 83.18%    E-value: 3.4e-34   Bit-score: 149.8

Fugu (fr2):
Medaka (oryLat2):
Region #1:   chr4:19925711-19925848   Identity: 76.76%    E-value: 2.1e-15   Bit-score: 82.1

Stickleback (gasAcu1):
Region #1:   chrVIII:6117780-6117920   Identity: 76.22%    E-value: 3e-15   Bit-score: 81.6

Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr22:40410890-40411036   Identity: 81.76%    E-value: 3.9e-21   Bit-score: 101.9

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):