UCNE: SOX2_Logan_2
(id = 24995)

General information about the entry
Entry location:intergenic
Position:chr3:181279192-181279517
Length:326 nt
Sequence:SOX2_Logan_2.fasta
Upstream gene:DNAJC19
Downstream gene:SOX2OT
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:CRCNE00001816; CRCNE00001817;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18064657-18064984        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34504204-34504525   Identity: 97.52%    E-value: 1.9e-75   Bit-score: 288.2

Armadillo (dasNov1):
Region #1:   scaffold_19409:49963-50288   Identity: 100%    E-value: 1.4e-74   Bit-score: 285.4

Opossum (monDom5):
Region #1:   chr7:204668189-204668516   Identity: 95.12%    E-value: 9.4e-69   Bit-score: 266.3

Platypus (ornAna1):
Region #1:   Ultra347:867648-867975   Identity: 98.48%    E-value: 4.8e-79   Bit-score: 299.6

Zebra_finch (taeGut1):
Region #1:   chr9:19414661-19414985   Identity: 97.23%    E-value: 1.2e-70   Bit-score: 271.1

Lizard (anoCar2):
Region #1:   chr3:1118829-1119156   Identity: 94.82%    E-value: 4.4e-71   Bit-score: 273.1

Painted_turtle (chrPic1):
Region #1:   JH584502:3544033-3544360   Identity: 97.26%    E-value: 1.4e-71   Bit-score: 275.2

Xenopus (xenTro3):
Region #1:   GL172881:1200017-1200328   Identity: 96.18%    E-value: 9.5e-64   Bit-score: 248.4

Fugu (fr2):
Region #1:   chrUn:303464435-303464571   Identity: 67.15%    E-value: 7.7e-08   Bit-score: 57.3
Region #2:   chrUn:303464636-303464755   Identity: 70.83%    E-value: 1.9e-07   Bit-score: 56.1

Medaka (oryLat2):
Region #1:   chr4:19925222-19925507   Identity: 63.79%    E-value: 7.8e-17   Bit-score: 87.3

Stickleback (gasAcu1):
Region #1:   chrVIII:6118161-6118367   Identity: 68.4%    E-value: 4.9e-19   Bit-score: 94.7

Tetraodon (tetNig2):
Region #1:   chr1:21692973-21693233   Identity: 67.56%    E-value: 2.3e-20   Bit-score: 98.9

Zebrafish (danRer7):
Region #1:   chr22:40410536-40410848   Identity: 93.33%    E-value: 9.3e-65   Bit-score: 247.4

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):