UCNE: SOX2_Mustafa
(id = 24999)

General information about the entry
Entry location:intergenic
Position:chr3:181327121-181327359
Length:239 nt
Sequence:SOX2_Mustafa.fasta
Upstream gene:DNAJC19
Downstream gene:SOX2OT
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:CRCNE00001798; CRCNE00001859;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18041964-18042199        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34559140-34559376   Identity: 94.51%    E-value: 2.2e-42   Bit-score: 177.9

Armadillo (dasNov1):
Region #1:   scaffold_63162:2518-2756   Identity: 99.16%    E-value: 4e-44   Bit-score: 183.8

Opossum (monDom5):
Region #1:   chr7:204731783-204732009   Identity: 96.51%    E-value: 1.4e-36   Bit-score: 159

Platypus (ornAna1):
Region #1:   Contig23758:1290-1526   Identity: 97.9%    E-value: 3.4e-46   Bit-score: 190.1

Zebra_finch (taeGut1):
Region #1:   chr9:19390717-19390953   Identity: 97.06%    E-value: 2.9e-44   Bit-score: 183

Lizard (anoCar2):
Region #1:   chr3:1075813-1076037   Identity: 96.02%    E-value: 5.8e-44   Bit-score: 182.5

Painted_turtle (chrPic1):
Region #1:   JH584502:3597015-3597251   Identity: 96.64%    E-value: 8.7e-43   Bit-score: 179.1

Xenopus (xenTro3):
Region #1:   GL172881:1166074-1166298   Identity: 79.22%    E-value: 1.1e-23   Bit-score: 115

Fugu (fr2):
Region #1:   chrUn:303469831-303469989   Identity: 69.57%    E-value: 2.2e-09   Bit-score: 62

Medaka (oryLat2):
Stickleback (gasAcu1):
Region #1:   chrVIII:6126951-6127099   Identity: 65.77%    E-value: 2.8e-06   Bit-score: 51.9

Tetraodon (tetNig2):
Region #1:   chr1:21687884-21688029   Identity: 69.86%    E-value: 2.5e-10   Bit-score: 65.2

Zebrafish (danRer7):
Region #1:   chr22:40389722-40389963   Identity: 77.37%    E-value: 1.5e-24   Bit-score: 113.4

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):