UCNE: SOX2_Robert
(id = 25012)

General information about the entry
Entry location:intron
Position:chr3:181410564-181410954
Length:391 nt
Sequence:SOX2_Robert.fasta
Overlapping gene:SOX2OT
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:CRCNE00001826;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18007396-18007785        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34630332-34630738   Identity: 77.8%    E-value: 6.3e-50   Bit-score: 203.6

Armadillo (dasNov1):
Region #1:   scaffold_3105:3223-3613   Identity: 98.47%    E-value: 1.4e-80   Bit-score: 305.6

Opossum (monDom5):
Region #1:   chr7:204829262-204829650   Identity: 94.12%    E-value: 5.7e-70   Bit-score: 270.6

Platypus (ornAna1):
Region #1:   Ultra347:1026087-1026471   Identity: 95.06%    E-value: 9.5e-82   Bit-score: 308.9

Zebra_finch (taeGut1):
Region #1:   chr9:19353978-19354367   Identity: 97.7%    E-value: 1.4e-81   Bit-score: 307.7

Lizard (anoCar2):
Region #1:   chr3:1021789-1022165   Identity: 89.23%    E-value: 6.7e-71   Bit-score: 272.7

Painted_turtle (chrPic1):
Region #1:   JH584502:3653249-3653638   Identity: 97.7%    E-value: 5e-82   Bit-score: 310.2

Xenopus (xenTro3):
Region #1:   GL172881:1140102-1140491   Identity: 81.68%    E-value: 5.4e-52   Bit-score: 209.7

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Region #1:   chr1:21674277-21674466   Identity: 63.68%    E-value: 1.6e-05   Bit-score: 49.9

Zebrafish (danRer7):
Region #1:   chr22:40350297-40350551   Identity: 79.3%    E-value: 9.3e-28   Bit-score: 124.7

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):