UCNE: SOX2_Sherlock
(id = 25016)

General information about the entry
Entry location:intron
Position:chr3:181425663-181426082
Length:420 nt
Sequence:SOX2_Sherlock.fasta
Overlapping gene:SOX2OT
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:CRCNE00001829;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:17994415-17994832        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34646100-34646517   Identity: 95.48%    E-value: 9.6e-100   Bit-score: 369.2

Armadillo (dasNov1):
Region #1:   scaffold_3105:20222-20640   Identity: 98.57%    E-value: 2.2e-101   Bit-score: 374.8

Opossum (monDom5):
Region #1:   chr7:204848909-204849326   Identity: 90.48%    E-value: 1.5e-85   Bit-score: 322.5

Platypus (ornAna1):
Region #1:   Ultra347:1038662-1039079   Identity: 95.47%    E-value: 5.9e-99   Bit-score: 366.1

Zebra_finch (taeGut1):
Region #1:   chr9:19340310-19340727   Identity: 96.67%    E-value: 3.6e-97   Bit-score: 359.5

Lizard (anoCar2):
Region #1:   chr3:990606-991091   Identity: 74.18%    E-value: 2.9e-57   Bit-score: 227.5

Painted_turtle (chrPic1):
Region #1:   JH584502:3668409-3668824   Identity: 95.71%    E-value: 2e-94   Bit-score: 351.5

Xenopus (xenTro3):
Region #1:   GL172881:1129523-1129778   Identity: 73.29%    E-value: 7.1e-26   Bit-score: 123

Fugu (fr2):
Region #1:   chrUn:373185224-373185385   Identity: 65.45%    E-value: 3.4e-06   Bit-score: 52.2
Region #2:   chrUn:368442169-368442330   Identity: 65.45%    E-value: 3.4e-06   Bit-score: 52.2

Medaka (oryLat2):
Region #1:   chr4:19857203-19857407   Identity: 64.42%    E-value: 5.8e-08   Bit-score: 58.2

Stickleback (gasAcu1):
Region #1:   chrVIII:6154803-6155090   Identity: 59.45%    E-value: 3.1e-07   Bit-score: 55.9

Tetraodon (tetNig2):
Region #1:   chr1:21669523-21669683   Identity: 65.85%    E-value: 2.1e-06   Bit-score: 52.9

Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):