UCNE: NKX6-1_Tarzan
(id = 25806)

General information about the entry
Entry location:intergenic
Position:chr4:85354761-85354997
Length:237 nt
Sequence:NKX6-1_Tarzan.fasta
Upstream gene:AGPAT9
Downstream gene:NKX6-1
Paralogs:chr10:134566918-134567098: NKX6-2_Tarzan;
Ultraconserved Genomic Regulatory Block (UGRB): NKX6-1_cluster: chr4:84597991-85364995
External links:
CONDOR database:CRCNE00011211; CRCNE00004267;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr4:48246348-48246584        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr5:101590591-101590825   Identity: 96.6%    E-value: 6.7e-38   Bit-score: 162.9
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_4435:53966-54105   Identity: 99.29%    E-value: 4.2e-19   Bit-score: 100.7
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr5:56529508-56529739   Identity: 98.28%    E-value: 1e-33   Bit-score: 149.5

Platypus (ornAna1):
Region #1:   Contig3908:27018-27247   Identity: 97.42%    E-value: 3.2e-40   Bit-score: 170.2
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr4:7669210-7669446   Identity: 97.05%    E-value: 3.7e-39   Bit-score: 166
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr5:43785352-43785583   Identity: 94.4%    E-value: 1.8e-39   Bit-score: 167.5
Region #2:   chr5:43739299-43739530   Identity: 94.4%    E-value: 1.8e-39   Bit-score: 167.5
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584595:4103523-4103759   Identity: 96.62%    E-value: 2.1e-38   Bit-score: 164.6
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172959:579883-580120   Identity: 92.02%    E-value: 4.5e-34   Bit-score: 149.4
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:75369895-75370085   Identity: 72.96%    E-value: 1.1e-18   Bit-score: 92.8
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   scaffold5154:4332-4473   Identity: 74.13%    E-value: 3.5e-11   Bit-score: 68.1
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr4:2957211-2957376   Identity: 74.57%    E-value: 4.5e-16   Bit-score: 84.2
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr21:17925417-17925601   Identity: 88.11%    E-value: 1.7e-19   Bit-score: 96.6

Lamprey (petMar1):
Region #1:   Contig21080:11591-11809   Identity: 72.6%    E-value: 2.6e-14   Bit-score: 83.1

Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):