UCNE: IRXA_Santiago_2
(id = 26848)

General information about the entry
Entry location:intergenic
Position:chr5:3428326-3428563
Length:238 nt
Sequence:IRXA_Santiago_2.fasta
Upstream gene:C5orf38
Downstream gene:IRX1
Paralogs:chr16:54350736-54350866
Ultraconserved Genomic Regulatory Block (UGRB): IRXA_cluster: chr5:2112526-4805550
External links:
CONDOR database:CRCNE00006656; CRCNE00006655;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:89334700-89334938        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr13:72097483-72097719   Identity: 97.47%    E-value: 1.2e-50   Bit-score: 205.3
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_17285:31118-31358   Identity: 89.63%    E-value: 3.1e-35   Bit-score: 154.3

Opossum (monDom5):
Region #1:   chr3:95995746-95995981   Identity: 96.61%    E-value: 4.3e-45   Bit-score: 187.3

Platypus (ornAna1):
Region #1:   chrX3:3807337-3807572   Identity: 96.19%    E-value: 4.4e-50   Bit-score: 203
This UCNE has 2 paralogous regions in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:92184109-92184344   Identity: 95.76%    E-value: 1.4e-48   Bit-score: 197.3
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343292:917487-917724   Identity: 92.44%    E-value: 5.1e-47   Bit-score: 192.6
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584427:65232-65467   Identity: 95.76%    E-value: 3.8e-47   Bit-score: 193.6
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172767:968892-969127   Identity: 92.8%    E-value: 9.1e-44   Bit-score: 181.6

Fugu (fr2):
Region #1:   chrUn:63937766-63937840   Identity: 86.67%    E-value: 4.9e-10   Bit-score: 64.2
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   chr16:8791623-8791689   Identity: 89.55%    E-value: 1.3e-08   Bit-score: 59.6
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrXX:6771359-6771431   Identity: 86.3%    E-value: 3e-09   Bit-score: 61.7
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr8:4489490-4489564   Identity: 86.67%    E-value: 3.1e-10   Bit-score: 64.8
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
This UCNE has 1 paralogous region in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):