UCNE: TNPO1_Emi
(id = 27325)

General information about the entry
Entry location:UTR
Position:chr5:72204530-72204743
Length:214 nt
Sequence:TNPO1_Emi.fasta
Overlapping gene:TNPO1
Paralogs:chr10:86151830-86152042
chr17:18366406-18366618
chr17:20384400-20384612
chr4:168298979-168299046
Ultraconserved Genomic Regulatory Block (UGRB): TNPO1_cluster: chr5:72204530-72634467
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chrZ:25900294-25900507        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr13:98844416-98844627   Identity: 96.26%    E-value: 1.1e-56   Bit-score: 225.1
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_207318:565-778   Identity: 98.13%    E-value: 2.3e-61   Bit-score: 240.9
Region #2:   scaffold_15137:3367-3549   Identity: 75.12%    E-value: 2.1e-27   Bit-score: 128.1
Region #3:   scaffold_195927:3973-4155   Identity: 75.12%    E-value: 2.6e-27   Bit-score: 127.8
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr3:47065491-47065703   Identity: 97.65%    E-value: 5.1e-62   Bit-score: 243.4

Platypus (ornAna1):
Region #1:   chr1:13284139-13284352   Identity: 95.79%    E-value: 1.8e-54   Bit-score: 217.4

Zebra_finch (taeGut1):
Region #1:   chrZ:66287712-66287924   Identity: 96.71%    E-value: 9.6e-59   Bit-score: 230.9

Lizard (anoCar2):
Region #1:   chr2:16272676-16272891   Identity: 91.67%    E-value: 4.3e-53   Bit-score: 212.7

Painted_turtle (chrPic1):
Region #1:   JH584533:9963895-9964107   Identity: 96.71%    E-value: 1.5e-55   Bit-score: 221.4

Xenopus (xenTro3):
Region #1:   GL172749:820559-820773   Identity: 92.09%    E-value: 2.9e-50   Bit-score: 203

Fugu (fr2):
Region #1:   chrUn:111538006-111538085   Identity: 77.5%    E-value: 3.8e-06   Bit-score: 51.1

Medaka (oryLat2):
Stickleback (gasAcu1):
Region #1:   chrXIV:1416879-1417004   Identity: 71.32%    E-value: 1.2e-10   Bit-score: 66.2

Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr5:36822931-36823076   Identity: 64.19%    E-value: 4.3e-06   Bit-score: 51.9

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):