UCNE: TNPO1_Florentino
(id = 27328)

General information about the entry
Entry location:UTR
Position:chr5:72206016-72206228
Length:213 nt
Sequence:TNPO1_Florentino.fasta
Overlapping gene:TNPO1
Paralogs:chr10:86153334-86153463
chr18:68171246-68171376
Ultraconserved Genomic Regulatory Block (UGRB): TNPO1_cluster: chr5:72204530-72634467
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chrZ:25898826-25899043        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr13:98842979-98843190   Identity: 87.91%    E-value: 3.7e-23   Bit-score: 113.8
This UCNE has 2 paralogous regions in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_15137:5980-6115   Identity: 88.11%    E-value: 1.1e-09   Bit-score: 69.3
Region #2:   scaffold_62822:3489-3598   Identity: 97.27%    E-value: 3.3e-09   Bit-score: 67.6
Region #3:   scaffold_2845:88945-89064   Identity: 89.17%    E-value: 6.5e-08   Bit-score: 63.3

Opossum (monDom5):
Region #1:   chr3:47066960-47067171   Identity: 97.65%    E-value: 9.7e-29   Bit-score: 132.8
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   chr1:13285633-13285840   Identity: 95.24%    E-value: 1.5e-32   Bit-score: 144.6

Zebra_finch (taeGut1):
Region #1:   chrZ:66289186-66289403   Identity: 94.06%    E-value: 1.1e-31   Bit-score: 141.1

Lizard (anoCar2):
Region #1:   chr2:16271248-16271456   Identity: 91.87%    E-value: 3.7e-29   Bit-score: 133.1

Painted_turtle (chrPic1):
Region #1:   JH584533:9965333-9965545   Identity: 96.26%    E-value: 1.5e-31   Bit-score: 141.6

Xenopus (xenTro3):
Region #1:   GL172749:822170-822399   Identity: 75%    E-value: 2e-15   Bit-score: 87.3

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):