UCNE: TNPO1_Xavier
(id = 27338)

General information about the entry
Entry location:intergenic
Position:chr5:72634261-72634467
Length:207 nt
Sequence:TNPO1_Xavier.fasta
Upstream gene:TMEM174
Downstream gene:FOXD1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): TNPO1_cluster: chr5:72204530-72634467
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chrZ:25671467-25671673        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr13:98476724-98476930   Identity: 95.65%    E-value: 3.5e-50   Bit-score: 203.5

Armadillo (dasNov1):
Region #1:   scaffold_3255:125399-125604   Identity: 97.09%    E-value: 3e-47   Bit-score: 194

Opossum (monDom5):
Region #1:   chr3:47694886-47695092   Identity: 96.62%    E-value: 1.8e-40   Bit-score: 171.7

Platypus (ornAna1):
Zebra_finch (taeGut1):
Region #1:   chrZ:66511901-66512107   Identity: 91.79%    E-value: 2e-42   Bit-score: 176.7

Lizard (anoCar2):
Region #1:   chr2:16057615-16057822   Identity: 89.42%    E-value: 1.3e-36   Bit-score: 157.8

Painted_turtle (chrPic1):
Region #1:   JH584533:10428464-10428670   Identity: 94.2%    E-value: 9.6e-45   Bit-score: 185.4

Xenopus (xenTro3):
Region #1:   GL172749:1017092-1017273   Identity: 72.28%    E-value: 0.0000000000000032   Bit-score: 86.6

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr5:36658095-36658194   Identity: 72.28%    E-value: 0.0000058   Bit-score: 51.4

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):