UCNE: TFAP2A_Naoko
(id = 28955)

General information about the entry
Entry location:intergenic
Position:chr6:9933347-9933775
Length:429 nt
Sequence:TFAP2A_Naoko.fasta
Upstream gene:HULC
Downstream gene:TFAP2A
Paralogs:chr1:36134271-36134392
chr6:51076840-51076982: TFAP2B_Naoko;
Ultraconserved Genomic Regulatory Block (UGRB): TFAP2A_cluster: chr6:8153373-10408287
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:64629705-64630157        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr13:40280720-40281155   Identity: 97.02%    E-value: 2.2e-71   Bit-score: 275

Armadillo (dasNov1):
Region #1:   scaffold_22820:17394-17821   Identity: 98.6%    E-value: 6.4e-64   Bit-score: 250.4

Opossum (monDom5):
Region #1:   chr3:332592175-332592596   Identity: 97.63%    E-value: 1.9e-57   Bit-score: 229.2

Platypus (ornAna1):
Region #1:   Ultra474:2971572-2972000   Identity: 97.44%    E-value: 1.1e-78   Bit-score: 298.9
This UCNE has 2 paralogous regions in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:68065115-68065540   Identity: 97.2%    E-value: 1.2e-73   Bit-score: 281.4
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343209:2021833-2022262   Identity: 95.58%    E-value: 1.6e-73   Bit-score: 281.5
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584783:1186143-1186571   Identity: 97.44%    E-value: 4e-74   Bit-score: 284.1
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172669:1324334-1324745   Identity: 96.36%    E-value: 1.1e-69   Bit-score: 268.6
This UCNE has 2 paralogous regions in Xenopus

Fugu (fr2):
Region #1:   chrUn:225258070-225258501   Identity: 89.84%    E-value: 3.3e-85   Bit-score: 314.7
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   chr20:10921806-10922231   Identity: 92.04%    E-value: 3.4e-78   Bit-score: 291.6

Stickleback (gasAcu1):
Region #1:   chrXXI:4162844-4163272   Identity: 91.4%    E-value: 3.9e-82   Bit-score: 304.7
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr6:925015-925447   Identity: 89.4%    E-value: 4.9e-83   Bit-score: 307.5
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   Zv9_NA461:7066-7485   Identity: 88.68%    E-value: 1.6e-54   Bit-score: 213.8

Lamprey (petMar1):
Region #1:   Contig843:19919-20092   Identity: 75.29%    E-value: 1.5e-10   Bit-score: 71.5

Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):