UCNE: TFAP2B_Naoko
(id = 29421)

General information about the entry
Entry location:intergenic
Position:chr6:51076801-51077044
Length:244 nt
Sequence:TFAP2B_Naoko.fasta
Upstream gene:TFAP2B
Downstream gene:PKHD1
Paralogs:chr1:36134252-36134394
chr6:9933345-9933496: TFAP2A_Naoko;
Ultraconserved Genomic Regulatory Block (UGRB): TFAP2B_cluster: chr6:50060900-51149432
External links:
CONDOR database:
VISTA Enhancer Browser:hs216;
UCE (Bejerano et al. 2004):uc.191 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr3:110884171-110884415        Identity: >95%
This UCNE has 2 paralogous regions in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr1:19558455-19558698   Identity: 98.36%    E-value: 2.7e-48   Bit-score: 197.5
This UCNE has 2 paralogous regions in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_1755:84807-85050   Identity: 99.18%    E-value: 4.7e-46   Bit-score: 190.2
This UCNE has 2 paralogous regions in Armadillo

Opossum (monDom5):
Region #1:   chr2:298922703-298922945   Identity: 98.35%    E-value: 2.5e-44   Bit-score: 184.8
This UCNE has 2 paralogous regions in Opossum

Platypus (ornAna1):
Region #1:   chrX1:3438463-3438705   Identity: 95.47%    E-value: 9.5e-46   Bit-score: 188.6
This UCNE has 2 paralogous regions in Platypus

Zebra_finch (taeGut1):
Region #1:   chr3:110101220-110101463   Identity: 97.13%    E-value: 8.5e-46   Bit-score: 188.1
This UCNE has 2 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chr1:122457944-122458179   Identity: 91.1%    E-value: 3e-40   Bit-score: 170.2
This UCNE has 2 paralogous regions in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584857:1656163-1656406   Identity: 97.13%    E-value: 5.4e-46   Bit-score: 189.8
This UCNE has 2 paralogous regions in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172699:1728798-1728938   Identity: 94.33%    E-value: 2.7e-20   Bit-score: 103.7
This UCNE has 3 paralogous regions in Xenopus

Fugu (fr2):
Region #1:   chrUn:358303172-358303307   Identity: 71.43%    E-value: 7.8e-11   Bit-score: 66.8
This UCNE has 2 paralogous regions in Fugu

Medaka (oryLat2):
Region #1:   chr24:19493626-19493763   Identity: 73.15%    E-value: 3e-11   Bit-score: 68.4
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrXVIII:6096157-6096322   Identity: 67.6%    E-value: 2.8e-10   Bit-score: 65.2
This UCNE has 2 paralogous regions in Stickleback

Tetraodon (tetNig2):
Region #1:   chrUn_random:94283929-94284064   Identity: 71.43%    E-value: 1.2e-10   Bit-score: 66.3
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr20:48343442-48343618   Identity: 83.15%    E-value: 4.5e-20   Bit-score: 98.5
This UCNE has 1 paralogous region in Zebrafish

Lamprey (petMar1):
This UCNE has 1 paralogous region in Lamprey

Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):