UCNE: HOXA_Harper
(id = 31178)

General information about the entry
Entry location:intron
Position:chr7:27591493-27591821
Length:329 nt
Sequence:HOXA_Harper.fasta
Overlapping gene:HIBADH
Paralogs:chr2:176719034-176719164: HOXD_Harper;
Ultraconserved Genomic Regulatory Block (UGRB): HOXA_cluster: chr7:26231439-27646322
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:32799378-32799705        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr6:52567373-52567702   Identity: 97.58%    E-value: 2.4e-79   Bit-score: 301.1
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_4341:6047-6375   Identity: 99.09%    E-value: 1.4e-75   Bit-score: 288.7

Opossum (monDom5):
Region #1:   chr8:296889485-296889814   Identity: 97.58%    E-value: 2.7e-70   Bit-score: 271.4

Platypus (ornAna1):
Region #1:   Ultra231:2655116-2655443   Identity: 97.26%    E-value: 8.3e-79   Bit-score: 298.9
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:52851834-52852160   Identity: 97.87%    E-value: 2.4e-77   Bit-score: 293.4
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343275:1080543-1080873   Identity: 94.56%    E-value: 6.2e-73   Bit-score: 279.2
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584682:925109-925436   Identity: 97.87%    E-value: 8.9e-77   Bit-score: 292.5

Xenopus (xenTro3):
Region #1:   GL172692:1207290-1207617   Identity: 91.52%    E-value: 1.6e-61   Bit-score: 241.1
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Region #1:   chrX:9959314-9959576   Identity: 58.67%    E-value: 6.7e-07   Bit-score: 54.4

Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr19:19094506-19094607   Identity: 75%    E-value: 7.2e-06   Bit-score: 51.7

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):