UCNE: PTPRD_Hana
(id = 34201)

General information about the entry
Entry location:intron
Position:chr9:8523419-8523650
Length:219 nt
Sequence:PTPRD_Hana.fasta
Overlapping gene:PTPRD
Paralogs:chr19:5256085-5256239
Ultraconserved Genomic Regulatory Block (UGRB): PTPRD_cluster: chr9:8095704-8526809
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chrZ:29416057-29416287        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr4:76135452-76135685   Identity: 88.46%    E-value: 5.2e-29   Bit-score: 133.3

Armadillo (dasNov1):
Region #1:   scaffold_881:98998-99228   Identity: 93.07%    E-value: 1.5e-33   Bit-score: 148.5

Opossum (monDom5):
Region #1:   chr6:170576886-170577116   Identity: 92.21%    E-value: 5.5e-30   Bit-score: 137
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   chrX5:12421881-12422109   Identity: 91.77%    E-value: 7.6e-35   Bit-score: 152.2

Zebra_finch (taeGut1):
Region #1:   chrZ:62710150-62710380   Identity: 92.21%    E-value: 3.9e-39   Bit-score: 165.8
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr2:53847146-53847372   Identity: 93.39%    E-value: 4e-37   Bit-score: 159.7
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584653:6143589-6143819   Identity: 93.94%    E-value: 2e-39   Bit-score: 167.8
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172722:1286083-1286311   Identity: 90.91%    E-value: 1e-35   Bit-score: 154.7
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:102839115-102839326   Identity: 69.59%    E-value: 2e-16   Bit-score: 85.3
Region #2:   chrUn:247954850-247954938   Identity: 78.65%    E-value: 5e-06   Bit-score: 50.7

Medaka (oryLat2):
Region #1:   chr18:9390723-9390877   Identity: 76.43%    E-value: 1.8e-13   Bit-score: 75.5
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrVII:5900976-5901138   Identity: 74.7%    E-value: 3.8e-13   Bit-score: 74.6
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chrUn_random:11789811-11789952   Identity: 68.46%    E-value: 5.5e-07   Bit-score: 53.9
Region #2:   chr15:4585053-4585239   Identity: 64.17%    E-value: 6.9e-07   Bit-score: 53.6
Region #3:   chrUn_random:11797669-11797803   Identity: 67.83%    E-value: 7e-06   Bit-score: 50.3
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr22:3479574-3479770   Identity: 74.75%    E-value: 7.4e-14   Bit-score: 77.7
Region #2:   chr7:76964539-76964764   Identity: 68.67%    E-value: 2.4e-08   Bit-score: 59.4

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):