UCNE: LHX2_Logan
(id = 35190)

General information about the entry
Entry location:intron
Position:chr9:126554797-126555050
Length:209 nt
Sequence:LHX2_Logan.fasta
Overlapping gene:DENND1A
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): LHX2_cluster: chr9:126504530-127148256
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr17:9883079-9883332        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr2:38159739-38159992   Identity: 81.89%    E-value: 3.9e-31   Bit-score: 140.3

Armadillo (dasNov1):
Region #1:   scaffold_137835:160-413   Identity: 82.28%    E-value: 1.1e-29   Bit-score: 135.7

Opossum (monDom5):
Region #1:   chr1:417989756-417990008   Identity: 77.87%    E-value: 1.1e-23   Bit-score: 116

Platypus (ornAna1):
Region #1:   Ultra134:327897-328150   Identity: 79.13%    E-value: 8.2e-32   Bit-score: 142.1

Zebra_finch (taeGut1):
Region #1:   chr17:10354145-10354398   Identity: 78.74%    E-value: 1.4e-29   Bit-score: 134
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343966:64753-64996   Identity: 75.82%    E-value: 5e-24   Bit-score: 116.1

Painted_turtle (chrPic1):
Region #1:   JH584698:3498123-3498376   Identity: 79.13%    E-value: 2.3e-30   Bit-score: 137.7

Xenopus (xenTro3):
Region #1:   GL173041:875234-875435   Identity: 74.4%    E-value: 2.8e-16   Bit-score: 90.1

Fugu (fr2):
Region #1:   chrUn:299308310-299308453   Identity: 90.28%    E-value: 6.9e-29   Bit-score: 126.6

Medaka (oryLat2):
Region #1:   chr9:27501529-27501671   Identity: 90.28%    E-value: 1.7e-25   Bit-score: 115.5

Stickleback (gasAcu1):
Region #1:   chrXIII:557026-557168   Identity: 90.28%    E-value: 8.5e-27   Bit-score: 119.9

Tetraodon (tetNig2):
Region #1:   chrUn_random:23847582-23847724   Identity: 88.89%    E-value: 1.8e-27   Bit-score: 121.9

Zebrafish (danRer7):
Region #1:   chr8:3186080-3186225   Identity: 83.11%    E-value: 3.1e-13   Bit-score: 75.6

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):