UCNE: PBX3_Chao
(id = 35261)

General information about the entry
Entry location:UTR
Position:chr9:128432187-128432761
Length:575 nt
Sequence:PBX3_Chao.fasta
Overlapping gene:MAPKAP1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): PBX3_cluster: chr9:128159800-129253379
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):uc.272 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr17:10437351-10437927        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr2:34434559-34435133   Identity: 98.78%    E-value: 9.4e-76   Bit-score: 290

Armadillo (dasNov1):
Region #1:   scaffold_33736:10875-11449   Identity: 98.78%    E-value: 3.7e-63   Bit-score: 248.3

Opossum (monDom5):
Region #1:   chr1:420482667-420483242   Identity: 97.4%    E-value: 5.5e-31   Bit-score: 141.7

Platypus (ornAna1):
Region #1:   Ultra39:5257543-5258119   Identity: 97.4%    E-value: 3.2e-73   Bit-score: 281.1

Zebra_finch (taeGut1):
Region #1:   chr17:10923990-10924565   Identity: 97.22%    E-value: 3.4e-78   Bit-score: 297
This UCNE has 5 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343535:274535-275117   Identity: 92.97%    E-value: 9.4e-75   Bit-score: 286
This UCNE has 7 paralogous regions in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584413:1427442-1428017   Identity: 97.05%    E-value: 4.2e-66   Bit-score: 257.8

Xenopus (xenTro3):
Region #1:   GL172958:99395-99854   Identity: 83.23%    E-value: 1.8e-38   Bit-score: 165.3

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr4:61051473-61052030   Identity: 57.69%    E-value: 4e-05   Bit-score: 50.1

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Region #1:   scaffold_206:79071-79636   Identity: 55.57%    E-value: 1.5e-07   Bit-score: 59.3
Region #2:   scaffold_102:301543-302049   Identity: 56.06%    E-value: 3.8e-07   Bit-score: 58
Region #3:   chr12q:1007628-1008117   Identity: 56.26%    E-value: 6.9e-07   Bit-score: 57.2
Region #4:   chr09q:3491636-3492203   Identity: 56.38%    E-value: 9.7e-07   Bit-score: 56.6
Region #5:   scaffold_220:96137-96615   Identity: 57.95%    E-value: 1.1e-06   Bit-score: 56.5
Region #6:   chr09q:3495115-3495664   Identity: 57.77%    E-value: 1.2e-06   Bit-score: 56.3
Region #7:   chr09q:3497125-3497641   Identity: 59.11%    E-value: 1.2e-06   Bit-score: 56.3
Region #8:   scaffold_260:2432-2960   Identity: 56.78%    E-value: 2.9e-06   Bit-score: 55.1
Region #9:   scaffold_2015:6892-7405   Identity: 57.59%    E-value: 3.6e-06   Bit-score: 54.8
Region #10:   scaffold_1104:12203-12776   Identity: 57.71%    E-value: 4.4e-06   Bit-score: 54.5
Region #11:   chr14q:2582070-2582611   Identity: 57.7%    E-value: 5e-06   Bit-score: 54.3
Region #12:   scaffold_1313:35-620   Identity: 57.38%    E-value: 1.2e-05   Bit-score: 53.1
Region #13:   scaffold_1407:519-937   Identity: 56.86%    E-value: 2.1e-05   Bit-score: 52.2
Region #14:   chr07q:7197704-7198243   Identity: 57.66%    E-value: 2.4e-05   Bit-score: 52
Region #15:   chr09q:833365-833935   Identity: 56.13%    E-value: 2.9e-05   Bit-score: 51.8
Region #16:   scaffold_1313:1231-1738   Identity: 57.51%    E-value: 3e-05   Bit-score: 51.7
Region #17:   chr09q:3494602-3495110   Identity: 57.51%    E-value: 3.2e-05   Bit-score: 51.6
Region #18:   chr12p:2053430-2053903   Identity: 56.86%    E-value: 3.2e-05   Bit-score: 51.6
Region #19:   chr01q:7569395-7569866   Identity: 58.4%    E-value: 4.5e-05   Bit-score: 51.1
Region #20:   scaffold_602:31629-32107   Identity: 57.64%    E-value: 6.1e-05   Bit-score: 50.7
Region #21:   chr04q:6464278-6464816   Identity: 55.6%    E-value: 6.4e-05   Bit-score: 50.6
Region #22:   chr09q:3493128-3493642   Identity: 56.47%    E-value: 9.1e-05   Bit-score: 50.1

Sea_urchin (strPur2):
Lancelet (braFlo1):