UCNE: SOX3_Vanessa
(id = 36378)

General information about the entry
Entry location:intergenic
Position:chrX:139614652-139614913
Length:262 nt
Sequence:SOX3_Vanessa.fasta
Upstream gene:SOX3
Downstream gene:RP1-177G6.2
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX3_cluster: chrX:139381246-139675267
External links:
CONDOR database:CRCNE00001949;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr4:10576217-10576478        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chrX:60918249-60918510   Identity: 94.66%    E-value: 1.9e-38   Bit-score: 164.9

Armadillo (dasNov1):
Region #1:   scaffold_42410:4959-5220   Identity: 97.33%    E-value: 2.2e-37   Bit-score: 161.6

Opossum (monDom5):
Region #1:   chrX:46430174-46430435   Identity: 90.84%    E-value: 1.4e-29   Bit-score: 135.9

Platypus (ornAna1):
Region #1:   Ultra15:375554-375815   Identity: 96.56%    E-value: 9.5e-45   Bit-score: 185.4

Zebra_finch (taeGut1):
Region #1:   chr4A:18766089-18766349   Identity: 91.98%    E-value: 5.5e-37   Bit-score: 158.9
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343310:361501-361758   Identity: 83.78%    E-value: 2.6e-32   Bit-score: 143.9

Painted_turtle (chrPic1):
Region #1:   JH584643:583990-584251   Identity: 94.66%    E-value: 1.1e-38   Bit-score: 165.6

Xenopus (xenTro3):
Region #1:   GL172698:1286206-1286462   Identity: 74.52%    E-value: 8.3e-19   Bit-score: 98.8

Fugu (fr2):
Region #1:   chrUn:202746149-202746353   Identity: 61.17%    E-value: 3.6e-07   Bit-score: 54.8

Medaka (oryLat2):
Stickleback (gasAcu1):
Region #1:   chrIV:5780099-5780368   Identity: 62.27%    E-value: 8.3e-10   Bit-score: 63.7

Tetraodon (tetNig2):
Region #1:   chr1:8746353-8746614   Identity: 61.36%    E-value: 3e-09   Bit-score: 61.7

Zebrafish (danRer7):
Region #1:   chr14:33696925-33697192   Identity: 63.47%    E-value: 2.3e-06   Bit-score: 53.1

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):