UCNE: RNF220_Antigone
(id = 3717)

General information about the entry
Entry location:intron
Position:chr1:44715674-44715874
Length:201 nt
Sequence:RNF220_Antigone.fasta
Overlapping gene:ERI3
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): RNF220_cluster: chr1:44715674-45035244
External links:
CONDOR database:
VISTA Enhancer Browser:hs277;
UCE (Bejerano et al. 2004):uc.18 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr8:21191770-21191971        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr4:117647160-117647360   Identity: 100%    E-value: 6.9e-50   Bit-score: 202.5

Armadillo (dasNov1):
Region #1:   scaffold_1246:4346-4546   Identity: 99.5%    E-value: 3.8e-44   Bit-score: 183.6

Opossum (monDom5):
Region #1:   chr2:10248296-10248493   Identity: 97.98%    E-value: 1.1e-45   Bit-score: 188.9

Platypus (ornAna1):
Region #1:   Contig19699:5490-5688   Identity: 93.97%    E-value: 5.4e-42   Bit-score: 175.9

Zebra_finch (taeGut1):
Region #1:   chr8:17348512-17348713   Identity: 94.55%    E-value: 9.6e-43   Bit-score: 177.7

Lizard (anoCar2):
Region #1:   chr4:109395393-109395594   Identity: 94.55%    E-value: 1.1e-45   Bit-score: 187.9

Painted_turtle (chrPic1):
Region #1:   JH584740:5511129-5511329   Identity: 93.53%    E-value: 3.6e-41   Bit-score: 173.5

Xenopus (xenTro3):
Region #1:   GL172637:350234-350437   Identity: 85.78%    E-value: 7.2e-33   Bit-score: 145.1

Fugu (fr2):
Region #1:   chrUn:265910031-265910127   Identity: 80.81%    E-value: 0.00000000028   Bit-score: 64.7

Medaka (oryLat2):
Region #1:   chr17:19287155-19287277   Identity: 70.73%    E-value: 0.0000014   Bit-score: 52.5

Stickleback (gasAcu1):
Region #1:   chrIII:4752251-4752330   Identity: 78.75%    E-value: 0.000011   Bit-score: 49.7

Tetraodon (tetNig2):
Region #1:   chr15:1688763-1688850   Identity: 80.68%    E-value: 0.000000017   Bit-score: 58.8

Zebrafish (danRer7):
Region #1:   chr2:32702297-32702506   Identity: 72.86%    E-value: 1.1e-19   Bit-score: 97
Region #2:   chr8:18844496-18844700   Identity: 72.33%    E-value: 3.8e-17   Bit-score: 88.5

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):