UCNE: LMO4_Frodo
(id = 4446)

General information about the entry
Entry location:intergenic
Position:chr1:87821911-87822766
Length:856 nt
Sequence:LMO4_Frodo.fasta
Upstream gene:LMO4
Downstream gene:PKN2
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): LMO4_cluster: chr1:87615911-88928077
External links:
CONDOR database:CRCNE00002666; CRCNE00002667;
VISTA Enhancer Browser:hs174; hs322;
UCE (Bejerano et al. 2004):uc.29 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr8:16417369-16418224        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:144173973-144174831   Identity: 95.93%    E-value: 4.9e-166   Bit-score: 590.5

Armadillo (dasNov1):
Region #1:   scaffold_3514:59269-60124   Identity: 99.18%    E-value: 4.5e-165   Bit-score: 587.4

Opossum (monDom5):
Region #1:   chr2:39473965-39474820   Identity: 97.55%    E-value: 3.2e-151   Bit-score: 541.7

Platypus (ornAna1):
Region #1:   chr4:48167309-48168166   Identity: 97.79%    E-value: 3e-185   Bit-score: 653.8

Zebra_finch (taeGut1):
Region #1:   chr8:12265718-12266437   Identity: 98.89%    E-value: 8.5e-147   Bit-score: 525.4

Lizard (anoCar2):
Region #1:   chr4:96955445-96956298   Identity: 96.72%    E-value: 3.4e-187   Bit-score: 660.1

Painted_turtle (chrPic1):
Region #1:   JH584690:595966-596821   Identity: 97.55%    E-value: 1.9e-174   Bit-score: 618.4

Xenopus (xenTro3):
Region #1:   GL172721:2876589-2877432   Identity: 94.79%    E-value: 5.1e-154   Bit-score: 549.7
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:137307617-137308347   Identity: 85.81%    E-value: 7e-152   Bit-score: 537.2
Region #2:   chrUn:179453228-179453501   Identity: 67.99%    E-value: 2.5e-23   Bit-score: 110.2

Medaka (oryLat2):
Region #1:   chr4:5089888-5090585   Identity: 87.99%    E-value: 1.1e-139   Bit-score: 496.8
Region #2:   scaffold6374:632-965   Identity: 64.72%    E-value: 5.2e-19   Bit-score: 96

Stickleback (gasAcu1):
Region #1:   chrVIII:2879696-2880391   Identity: 85.67%    E-value: 3.2e-139   Bit-score: 495.3
Region #2:   chrXIV:14555545-14555844   Identity: 66.77%    E-value: 3.2e-22   Bit-score: 106.7
Region #3:   chrXIII:382150-382445   Identity: 65%    E-value: 5.5e-19   Bit-score: 95.9

Tetraodon (tetNig2):
Region #1:   chr1:10007960-10008343   Identity: 88.54%    E-value: 1.6e-81   Bit-score: 303.5
Region #2:   chrUn_random:95890548-95890765   Identity: 69.51%    E-value: 8.3e-19   Bit-score: 95.1

Zebrafish (danRer7):
Region #1:   chr6:25611033-25611747   Identity: 89.39%    E-value: 3.3e-121   Bit-score: 436.3
Region #2:   chr5:34574816-34575288   Identity: 60.42%    E-value: 2.4e-16   Bit-score: 87.9
Region #3:   chr8:55027279-55027446   Identity: 72.78%    E-value: 0.00000000025   Bit-score: 67.9

Lamprey (petMar1):
Region #1:   Contig48787:1910-2297   Identity: 75.06%    E-value: 7.6e-39   Bit-score: 166.5
Region #2:   Contig354:29316-29574   Identity: 68.8%    E-value: 0.0000000000000013   Bit-score: 89.2
Region #3:   Contig4004:15594-15873   Identity: 66.55%    E-value: 0.000000000000063   Bit-score: 83.7

Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):