UCNE: LHX9_Aida
(id = 5315)

General information about the entry
Entry location:intron
Position:chr1:197565969-197566207
Length:239 nt
Sequence:LHX9_Aida.fasta
Overlapping gene:DENND1B
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): LHX9_cluster: chr1:197565969-198361006
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr8:2440586-2440830        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr1:139100284-139100523   Identity: 92.95%    E-value: 4e-46   Bit-score: 190.3

Armadillo (dasNov1):
Region #1:   scaffold_43733:9743-9984   Identity: 93.39%    E-value: 2.1e-47   Bit-score: 194.7

Opossum (monDom5):
Region #1:   chr2:98155940-98156182   Identity: 93.42%    E-value: 2.1e-45   Bit-score: 188.3

Platypus (ornAna1):
Region #1:   chr4:47185278-47185520   Identity: 82.04%    E-value: 3.5e-34   Bit-score: 150.1
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr8:4616932-4617176   Identity: 91.43%    E-value: 2.9e-46   Bit-score: 189.7

Lizard (anoCar2):
Region #1:   chrUn_GL343432:554152-554396   Identity: 90.61%    E-value: 3.6e-47   Bit-score: 193.2

Painted_turtle (chrPic1):
Region #1:   JH584765:2153832-2154074   Identity: 93%    E-value: 9e-48   Bit-score: 195.7

Xenopus (xenTro3):
Fugu (fr2):
Region #1:   chrUn:252343147-252343266   Identity: 80.83%    E-value: 3e-16   Bit-score: 84.8

Medaka (oryLat2):
Region #1:   chr4:15203986-15204104   Identity: 79.83%    E-value: 0.000000000000028   Bit-score: 78.4
Region #2:   chr4:15203580-15203699   Identity: 77.5%    E-value: 0.0000000000032   Bit-score: 71.5

Stickleback (gasAcu1):
Region #1:   chrVIII:9044925-9045215   Identity: 64.6%    E-value: 8.4e-23   Bit-score: 106.8

Tetraodon (tetNig2):
Region #1:   chr1:19743123-19743241   Identity: 80.67%    E-value: 5e-16   Bit-score: 84.1

Zebrafish (danRer7):
Region #1:   chr22:24476568-24476787   Identity: 75.91%    E-value: 5.1e-25   Bit-score: 114.9

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):