UCNE: LHX9_Haruki_2
(id = 5336)

General information about the entry
Entry location:intergenic
Position:chr1:197900024-197900629
Length:606 nt
Sequence:LHX9_Haruki_2.fasta
Upstream gene:LHX9
Downstream gene:NEK7
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): LHX9_cluster: chr1:197565969-198361006
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr8:2286164-2286787        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr1:138829121-138829721   Identity: 96.2%    E-value: 1.4e-81   Bit-score: 309.4

Armadillo (dasNov1):
Region #1:   scaffold_19314:52116-52719   Identity: 98.02%    E-value: 3.1e-77   Bit-score: 295.1

Opossum (monDom5):
Region #1:   chr2:98652513-98653116   Identity: 97.2%    E-value: 6.8e-65   Bit-score: 254.4

Platypus (ornAna1):
Region #1:   chr4:47014998-47015605   Identity: 96.23%    E-value: 6.7e-96   Bit-score: 356.5

Zebra_finch (taeGut1):
Region #1:   chr8:4798002-4798607   Identity: 96.38%    E-value: 1.5e-86   Bit-score: 324.8

Lizard (anoCar2):
Region #1:   chrUn_GL343211:48258-48870   Identity: 92.85%    E-value: 1.4e-88   Bit-score: 332

Painted_turtle (chrPic1):
Region #1:   JH584765:2432442-2433047   Identity: 97.2%    E-value: 4.3e-86   Bit-score: 324.3

Xenopus (xenTro3):
Region #1:   GL172655:4432702-4433114   Identity: 67.56%    E-value: 2.9e-17   Bit-score: 94.9

Fugu (fr2):
Region #1:   chrUn:252266034-252266584   Identity: 71.63%    E-value: 1.8e-51   Bit-score: 203.2

Medaka (oryLat2):
Region #1:   chr4:15316460-15316944   Identity: 80.92%    E-value: 5.1e-56   Bit-score: 218.4

Stickleback (gasAcu1):
Region #1:   chrVIII:8958125-8958618   Identity: 80.08%    E-value: 1.3e-60   Bit-score: 233.7

Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr22:24970497-24971002   Identity: 74.53%    E-value: 2.7e-30   Bit-score: 133.8

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):