UCNE: LHX9_Nemo
(id = 5337)

General information about the entry
Entry location:intergenic
Position:chr1:197900998-197901200
Length:203 nt
Sequence:LHX9_Nemo.fasta
Upstream gene:LHX9
Downstream gene:NEK7
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): LHX9_cluster: chr1:197565969-198361006
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr8:2285592-2285795        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr1:138828560-138828763   Identity: 98.53%    E-value: 1.3e-45   Bit-score: 188.4

Armadillo (dasNov1):
Region #1:   scaffold_19314:53086-53282   Identity: 99.49%    E-value: 5.1e-39   Bit-score: 166.6

Opossum (monDom5):
Region #1:   chr2:98653487-98653684   Identity: 97.47%    E-value: 4.9e-38   Bit-score: 163.6

Platypus (ornAna1):
Region #1:   chr4:47014412-47014616   Identity: 97.07%    E-value: 7e-45   Bit-score: 185.5

Zebra_finch (taeGut1):
Region #1:   chr8:4799031-4799233   Identity: 96.55%    E-value: 1.3e-42   Bit-score: 177.3

Lizard (anoCar2):
Region #1:   chrUn_GL343211:49891-50093   Identity: 95.61%    E-value: 1.3e-43   Bit-score: 181

Painted_turtle (chrPic1):
Region #1:   JH584765:2433423-2433626   Identity: 96.57%    E-value: 2.1e-41   Bit-score: 174.3

Xenopus (xenTro3):
Region #1:   GL172655:4432023-4432218   Identity: 82.14%    E-value: 2.7e-23   Bit-score: 113.3

Fugu (fr2):
Region #1:   chrUn:252265511-252265691   Identity: 87.98%    E-value: 5.7e-36   Bit-score: 150.1

Medaka (oryLat2):
Region #1:   chr4:15317294-15317492   Identity: 84.42%    E-value: 1.7e-32   Bit-score: 138.7

Stickleback (gasAcu1):
Region #1:   chrVIII:8957552-8957756   Identity: 84.88%    E-value: 6.4e-36   Bit-score: 150.1

Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr22:24970016-24970207   Identity: 82%    E-value: 3.4e-24   Bit-score: 111.9

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):