UCNE: LHX9_Zhong
(id = 5349)

General information about the entry
Entry location:intergenic
Position:chr1:198360804-198361006
Length:203 nt
Sequence:LHX9_Zhong.fasta
Upstream gene:NEK7
Downstream gene:ATP6V1G3
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): LHX9_cluster: chr1:197565969-198361006
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr8:2158065-2158267        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr1:138385353-138385555   Identity: 98.52%    E-value: 1.8e-56   Bit-score: 224.4

Armadillo (dasNov1):
Region #1:   scaffold_5431:9759-9961   Identity: 96.06%    E-value: 9.7e-54   Bit-score: 215.5

Opossum (monDom5):
Region #1:   chr2:99233591-99233793   Identity: 97.04%    E-value: 2e-54   Bit-score: 218

Platypus (ornAna1):
Region #1:   Contig10912:10773-10974   Identity: 87.25%    E-value: 9.5e-42   Bit-score: 175

Zebra_finch (taeGut1):
Region #1:   chr8:4941030-4941232   Identity: 92.61%    E-value: 3.6e-49   Bit-score: 199.1

Lizard (anoCar2):
Region #1:   chrUn_AAWZ02038995:7449-7651   Identity: 85.71%    E-value: 3.5e-43   Bit-score: 179.7
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584765:2735834-2736036   Identity: 95.57%    E-value: 6e-51   Bit-score: 206

Xenopus (xenTro3):
Region #1:   GL172655:4345746-4345942   Identity: 70.2%    E-value: 3.9e-19   Bit-score: 99.6

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr22:24814824-24815003   Identity: 70%    E-value: 1.4e-17   Bit-score: 90

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):