UCNE: PAX2_Amadeus
(id = 7305)

General information about the entry
Entry location:intergenic
Position:chr10:102375094-102375343
Length:250 nt
Sequence:PAX2_Amadeus.fasta
Upstream gene:HIF1AN
Downstream gene:PAX2
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): PAX2_cluster: chr10:102372689-102619078
External links:
CONDOR database:CRCNE00000056; CRCNE00000124; CRCNE00000125;
VISTA Enhancer Browser:hs225;
UCE (Bejerano et al. 2004):uc.295 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr6:18423774-18424031        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr19:44633844-44634092   Identity: 98.8%    E-value: 6.5e-59   Bit-score: 232.8

Armadillo (dasNov1):
Region #1:   scaffold_24616:53061-53310   Identity: 99.6%    E-value: 1.1e-63   Bit-score: 248.9

Opossum (monDom5):
Region #1:   chr1:111905443-111905692   Identity: 98.4%    E-value: 5.7e-64   Bit-score: 250

Platypus (ornAna1):
Zebra_finch (taeGut1):
Region #1:   chr6:16355330-16355580   Identity: 94.82%    E-value: 9e-59   Bit-score: 231.2

Lizard (anoCar2):
Region #1:   chrUn_GL343388:447464-447709   Identity: 93.09%    E-value: 5.5e-56   Bit-score: 222.5

Painted_turtle (chrPic1):
Region #1:   JH584495:1281232-1281477   Identity: 95.53%    E-value: 1e-58   Bit-score: 232.1

Xenopus (xenTro3):
Region #1:   GL172840:1193926-1194166   Identity: 93.78%    E-value: 7.3e-54   Bit-score: 215.2

Fugu (fr2):
Region #1:   chrUn:159033211-159033438   Identity: 85.78%    E-value: 2.2e-47   Bit-score: 188.3
Region #2:   chrUn:126233493-126233719   Identity: 75%    E-value: 7.4e-34   Bit-score: 143.4

Medaka (oryLat2):
Region #1:   chr15:21121552-21121803   Identity: 78.43%    E-value: 2.5e-40   Bit-score: 165
Region #2:   chr19:10232461-10232699   Identity: 77.05%    E-value: 3.2e-36   Bit-score: 151.3

Stickleback (gasAcu1):
Region #1:   chrVI:9644197-9644428   Identity: 84.68%    E-value: 2.1e-47   Bit-score: 188.5
Region #2:   chrV:987436-987681   Identity: 79.68%    E-value: 2.3e-41   Bit-score: 168.5

Tetraodon (tetNig2):
Region #1:   chr17:5908978-5909205   Identity: 84.91%    E-value: 2.9e-46   Bit-score: 184.6
Region #2:   chrUn_random:77699563-77699789   Identity: 74.18%    E-value: 9.7e-33   Bit-score: 139.7

Zebrafish (danRer7):
Region #1:   chr13:29817349-29817589   Identity: 83.2%    E-value: 9.9e-43   Bit-score: 173.8

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):