UCNE: PAX2_Benjamin
(id = 7313)

General information about the entry
Entry location:intergenic
Position:chr10:102414204-102414471
Length:268 nt
Sequence:PAX2_Benjamin.fasta
Upstream gene:HIF1AN
Downstream gene:PAX2
Paralogs:chr2:96365575-96365783
chr2:114099532-114099740
Ultraconserved Genomic Regulatory Block (UGRB): PAX2_cluster: chr10:102372689-102619078
External links:
CONDOR database:CRCNE00000063; CRCNE00000133; CRCNE00000064;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr6:18371844-18372112        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr19:44670189-44670456   Identity: 99.63%    E-value: 2.3e-54   Bit-score: 217.8
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr1:111850408-111850675   Identity: 99.25%    E-value: 2.2e-46   Bit-score: 191.7
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Contig5892:6844-7112   Identity: 98.14%    E-value: 1.5e-57   Bit-score: 227.9
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr6:16293009-16293274   Identity: 96.99%    E-value: 3.9e-51   Bit-score: 206

Lizard (anoCar2):
Region #1:   chrUn_GL343388:617047-617312   Identity: 94.36%    E-value: 1.1e-50   Bit-score: 205

Painted_turtle (chrPic1):
Region #1:   JH584495:1190973-1191238   Identity: 97.37%    E-value: 2.3e-53   Bit-score: 214.4

Xenopus (xenTro3):
Region #1:   GL172840:1302184-1302446   Identity: 96.2%    E-value: 1.7e-49   Bit-score: 200.8
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:126260141-126260422   Identity: 85.11%    E-value: 2.7e-53   Bit-score: 208
Region #2:   chrUn:159007046-159007353   Identity: 75.32%    E-value: 1.8e-42   Bit-score: 172.1
Region #3:   chrUn:75586260-75586415   Identity: 73.12%    E-value: 1.6e-14   Bit-score: 79.2

Medaka (oryLat2):
Region #1:   chr19:10196816-10197089   Identity: 86.86%    E-value: 2e-51   Bit-score: 201.9
Region #2:   chr15:21083898-21084208   Identity: 75.24%    E-value: 3e-39   Bit-score: 161.5
Region #3:   chr12:11924441-11924597   Identity: 72.67%    E-value: 2.2e-12   Bit-score: 72.2

Stickleback (gasAcu1):
Region #1:   chrV:960009-960257   Identity: 88.35%    E-value: 7.2e-51   Bit-score: 200.2
Region #2:   chrVI:9677360-9677663   Identity: 76.64%    E-value: 3.5e-43   Bit-score: 174.6
Region #3:   chrXIV:5554674-5554842   Identity: 70.52%    E-value: 9.7e-14   Bit-score: 76.8

Tetraodon (tetNig2):
Region #1:   chr17:5933877-5934178   Identity: 75.5%    E-value: 2.5e-43   Bit-score: 174.9
Region #2:   chrUn_random:77673979-77674139   Identity: 92.55%    E-value: 6e-35   Bit-score: 147.1
Region #3:   chr4:2754291-2754446   Identity: 73.12%    E-value: 7e-15   Bit-score: 80.4
Region #4:   chrUn_random:77674294-77674375   Identity: 89.02%    E-value: 4.5e-11   Bit-score: 67.8

Zebrafish (danRer7):
Region #1:   chr13:29901596-29901870   Identity: 88.73%    E-value: 2.8e-43   Bit-score: 175.7
Region #2:   chr12:46897415-46897621   Identity: 66.37%    E-value: 5e-11   Bit-score: 68.6

Lamprey (petMar1):
Region #1:   Contig29761:11707-11862   Identity: 79.75%    E-value: 3.4e-14   Bit-score: 82.9

Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):