UCNE: SOX6_Aurore
(id = 8422)

General information about the entry
Entry location:intron
Position:chr11:16040034-16040405
Length:372 nt
Sequence:SOX6_Aurore.fasta
Overlapping gene:SOX6
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX6_cluster: chr11:15389475-16621980
External links:
CONDOR database:CRCNE00002294; CRCNE00002293;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr5:12169509-12169880        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr7:115516335-115516706   Identity: 97.04%    E-value: 7.7e-48   Bit-score: 196.6

Armadillo (dasNov1):
Region #1:   scaffold_536:55632-56003   Identity: 98.92%    E-value: 5.3e-46   Bit-score: 190.7

Opossum (monDom5):
Region #1:   chr5:245487553-245487926   Identity: 96.26%    E-value: 1.9e-35   Bit-score: 155.9

Platypus (ornAna1):
Region #1:   Ultra270:1307998-1308369   Identity: 96.51%    E-value: 4.5e-56   Bit-score: 223.5

Zebra_finch (taeGut1):
Region #1:   chr5:10837879-10838250   Identity: 97.85%    E-value: 1.2e-51   Bit-score: 208.2

Lizard (anoCar2):
Region #1:   chr1:65786681-65787053   Identity: 95.44%    E-value: 1.7e-52   Bit-score: 211.5

Painted_turtle (chrPic1):
Region #1:   JH584746:516305-516676   Identity: 97.31%    E-value: 3.6e-50   Bit-score: 204.3

Xenopus (xenTro3):
Fugu (fr2):
Region #1:   chrUn:7145478-7145752   Identity: 66.3%    E-value: 4.5e-17   Bit-score: 88.2

Medaka (oryLat2):
Region #1:   chr3:17661313-17661586   Identity: 67.72%    E-value: 4.6e-13   Bit-score: 75

Stickleback (gasAcu1):
Tetraodon (tetNig2):
Region #1:   chr5:6834830-6835108   Identity: 67.72%    E-value: 6.9e-18   Bit-score: 90.9

Zebrafish (danRer7):
Region #1:   chr7:28559223-28559503   Identity: 67.93%    E-value: 2.8e-08   Bit-score: 59.9

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):