UCNE: SOX6_Johanna
(id = 8471)

General information about the entry
Entry location:intron
Position:chr11:16316389-16316706
Length:318 nt
Sequence:SOX6_Johanna.fasta
Overlapping gene:SOX6
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX6_cluster: chr11:15389475-16621980
External links:
CONDOR database:CRCNE00002260; CRCNE00002259;
VISTA Enhancer Browser:hs236;
UCE (Bejerano et al. 2004):uc.322 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr5:12349453-12349768        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr7:115749722-115750039   Identity: 99.37%    E-value: 8.5e-44   Bit-score: 183

Armadillo (dasNov1):
Region #1:   scaffold_4657:58543-58860   Identity: 98.74%    E-value: 9e-39   Bit-score: 166.4

Opossum (monDom5):
Region #1:   chr5:245212686-245213003   Identity: 100%    E-value: 7.4e-36   Bit-score: 157

Platypus (ornAna1):
Region #1:   Ultra270:1067147-1067464   Identity: 98.43%    E-value: 3.3e-50   Bit-score: 203.8

Zebra_finch (taeGut1):
Region #1:   chr5:11008255-11008572   Identity: 98.74%    E-value: 1.2e-45   Bit-score: 188

Lizard (anoCar2):
Region #1:   chr1:65984999-65985308   Identity: 89.06%    E-value: 1e-38   Bit-score: 165.5

Painted_turtle (chrPic1):
Region #1:   JH584746:304169-304486   Identity: 98.43%    E-value: 2.4e-44   Bit-score: 184.7

Xenopus (xenTro3):
Region #1:   GL173441:35599-35901   Identity: 71.62%    E-value: 3.8e-16   Bit-score: 90.3

Fugu (fr2):
Region #1:   chrUn:7098574-7098903   Identity: 64.64%    E-value: 4.7e-16   Bit-score: 84.6

Medaka (oryLat2):
Region #1:   chr3:17606294-17606569   Identity: 69.96%    E-value: 2.9e-17   Bit-score: 88.7

Stickleback (gasAcu1):
Region #1:   chrII:9559293-9559536   Identity: 63.96%    E-value: 4.9e-09   Bit-score: 61.5

Tetraodon (tetNig2):
Region #1:   chr5:6909026-6909356   Identity: 64.16%    E-value: 7e-15   Bit-score: 80.7

Zebrafish (danRer7):
Region #1:   chr7:28468649-28468963   Identity: 73.27%    E-value: 1.8e-16   Bit-score: 86.9

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):